Ronald W. Davis: Publications through 2020

Publications

  1. Statistics and its interface.  
    Zhang, Y., Ouyang, Z., Qian, W.J., Smith, R.D., Wong, W.H. and Davis, R.W. Statistics and its interface 13.4 (2020): 465-474. doi: https//dx.doi.org/10.4310/SII.2020.v13.n4.a4.

  2. Community members in activated sludge as determined by molecular probe technology.  
    Xu, W., Brand, V.R., Suresh, S., Jensen, M.A., Davis, R.W., Criddle, C.S., Onge, R.P.S. and Hyman, R.W. Water research 168 (2020): 115104. doi: https://doi.org/10.1016/j.watres.2019.115104.

  3. Identification of polyketide biosynthetic gene clusters that harbor self-resistance target genes. 
    Vandova, G.A., Nivina, A., Khosla, C., Davis, R.W., Fisher, C.R. and Hillenmeyer, M.E.  BioRxiv (2020): 2020-06. doi: https://doi.org/10.1101/2020.06.01.128595.

  4. Automated motion tracking and data extraction for red blood cell biomechanics. 
    Kumar, A., Schmidt, B.R., Sanchez, Z.A.C., Yazar, F., Davis, R.W., Ramasubramanian, A.K. and Saha, A.K. Current Protocols in Cytometry 93.1 (2020): e75. doi:10.1002/cpcy.75.

  5. The IDO metabolic trap hypothesis for the etiology of ME/CFS. 
    Kashi, A.A., Davis, R.W. and Phair, R.D. Diagnostics 9.3 (2019): 82. doi: 10.3390/diagnostics9030082.

  6. A nanoelectronics-blood-based diagnostic biomarker for myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS). 
    Esfandyarpour, R., Kashi, A., Nemat-Gorgani, M., Wilhelmy, J. and Davis, R.W. Proceedings of the National Academy of Sciences 116.21 (2019): 10250-10257. doi: 10.1073/pnas.1901274116. Epub 2019 Apr 29.

  7. Red blood cell deformability is diminished in patients with Chronic Fatigue Syndrome. 
    Saha, A.K., Schmidt, B.R., Wilhelmy, J., Nguyen, V., Abugherir, A., Do, J.K., Nemat-Gorgani, M., Davis, R.W. and Ramasubramanian, A.K. Clinical Hemorheology and Microcirculation 71.1 (2019): 113-116. doi: 10.3233/CH-180469.

  8. A biosensor-based approach reveals links between efflux pump expression and cell cycle regulation in pleiotropic drug resistance of yeast. 
    Li, J., Kolberg, K., Schlecht, U., Onge, R.P.S., Aparicio, A.M., Horecka, J., Davis, R.W., Hillenmeyer, M.E. and Harvey, C.J. Journal of Biological Chemistry 294.4 (2019): 1257-1266. doi: 10.1074/jbc.RA118.003904. Epub 2018 Dec 4.

  9. Combining newborn metabolic and DNA analysis for second-tier testing of methylmalonic acidemia. 
    Peng, G., Shen, P., Gandotra, N., Le, A., Fung, E., Jelliffe-Pawlowski, L., Davis, R.W., Enns, G.M., Zhao, H., Cowan, T.M. and Scharfe, C. Genetics in Medicine 21.4 (2019): 896-903. doi: 10.1038/s41436-018-0272-5.

  10. Multiplexed precision genome editing with trackable genomic barcodes in yeast. 
    Roy, K.R., Smith, J.D., Vonesch, S.C., Lin, G., Tu, C.S., Lederer, A.R., Chu, A., Suresh, S., Nguyen, M., Horecka, J. and Tripathi, A. Nature biotechnology 36.6 (2018): 512-520. doi: 10.1038/nbt.4137. Epub 2018 May 7.

  11. HEx: A heterologous expression platform for the discovery of fungal natural products. 
    Harvey, C.J., Tang, M., Schlecht, U., Horecka, J., Fischer, C.R., Lin, H.C., Li, J., Naughton, B., Cherry, J., Miranda, M. and Li, Y.F. Science advances 4.4 (2018): eaar5459. doi: 10.1126/sciadv.aar5459. eCollection 2018 Apr.

  12. Template-independent enzymatic oligonucleotide synthesis (TiEOS): Its history, prospects, and challenges. 
    Jensen, M.A. and Davis, R.W. Biochemistry 57.12 (2018): 1821-1832. doi: 10.1021/acs.biochem.7b00937. Epub 2018 Mar 13. Review.

  13. Streamlined circular proximity ligation assay provides high stringency and compatibility with low-affinity antibodies. 
    Jalili, R., Horecka, J., Swartz, J.R., Davis, R.W. and Persson, H.H. Proceedings of the National Academy of Sciences 115.5 (2018): E925-E933. doi: 10.1073/pnas.1718283115.

  14. Quantitative analysis of protein interaction network dynamics in yeast. 
    Celaj, A., Schlecht, U., Smith, J.D., Xu, W., Suresh, S., Miranda, M., Aparicio, A.M., Proctor, M., Davis, R.W., Roth, F.P. and St. Onge, R.P. Molecular Systems Biology 13.7 (2017): 934. doi: 10.15252/msb.20177532.

  15. Autonomous sweat extraction and analysis applied to cystic fibrosis and glucose monitoring using a fully integrated wearable platform. 
    Emaminejad, S., Gao, W., Wu, E., Davies, Z.A., Yin Yin Nyein, H., Challa, S., Ryan, S.P., Fahad, H.M., Chen, K., Shahpar, Z. and Talebi, S. Proceedings of the National Academy of sciences 114.18 (2017): 4625-4630. doi: 10.1073/pnas.1701740114.

  16. Heterologous expression of diverse propionyl-CoA carboxylases affects polyketide production in Escherichia coli. 
    Vandova, G.A., O'brien, R.V., Lowry, B., Robbins, T.F., Fischer, C.R., Davis, R.W., Khosla, C., Harvey, C.J. and Hillenmeyer, M.E. The Journal of antibiotics 70.7 (2017): 859-863. doi: 10.1038/ja.2017.38.

  17. Multifunctional, inexpensive, and reusable nanoparticle-printed biochip for cell manipulation and diagnosis. 
    Esfandyarpour, R., DiDonato, M.J., Yang, Y., Durmus, N.G., Harris, J.S. and Davis, R.W. Proceedings of the national academy of sciences 114.8 (2017): E1306-E1315. doi: 10.1073/pnas.1621318114.

  18. A method for high-throughput production of sequence-verified DNA libraries and strain collections. 
    Smith, J.D., Schlecht, U., Xu, W., Suresh, S., Horecka, J., Proctor, M.J., Aiyar, R.S., Bennett, R.A., Chu, A., Li, Y.F. and Roy, K.  Molecular systems biology 13.2 (2017): 913. doi: 10.15252/msb.20167233.

  19. Application of 3D printing for smart objects with embedded electronic sensors and systems. 
    Ota, H., Emaminejad, S., Gao, Y., Zhao, A., Wu, E., Challa, S., Chen, K., Fahad, H.M., Jha, A.K., Kiriya, D. and Gao, W. Advanced Materials Technologies 1.1 (2016): 1600013. doi: 10.1002/admt.201600013.

  20. Systematic Mapping of Chemical-Genetic Interactions in Saccharomyces cerevisiae. 
    Suresh, S., Schlecht, U., Xu, W., Bray, W., Miranda, M., Davis, R.W., Nislow, C., Giaever, G., Lokey, R.S. and Onge, R.P.S. Cold Spring Harbor Protocols 2016.9 (2016): pdb-top077701. doi: 10.1101/pdb.top077701.

  21. Identification of chemical-genetic interactions via parallel analysis of barcoded yeast strains. 
    Suresh, S., Schlecht, U., Xu, W., Miranda, M., Davis, R.W., Nislow, C., Giaever, G. and Onge, R.P.S. Cold Spring Harbor Protocols 2016.9 (2016): pdb-prot088054. doi: 10.1101/pdb.prot088054.

  22. Ndt80 activates the meiotic ORC1 transcript isoform and SMA2 via a bi-directional middle sporulation element in Saccharomyces cerevisiae. 
    Xie, B., Horecka, J., Chu, A., Davis, R.W., Becker, E. and Primig, M. RNA biology 13.9 (2016): 772-782. doi: 10.1080/15476286.2016.1191738.

  23. A wearable electrochemical platform for noninvasive simultaneous monitoring of Ca(2+) and pH. 
    Nyein, H.Y.Y., Gao, W., Shahpar, Z., Emaminejad, S., Challa, S., Chen, K., Fahad, H.M., Tai, L.C., Ota, H., Davis, R.W. and Javey, A. ACS nano 10.7 (2016): 7216-7224. doi: 10.1021/acsnano.6b04005.

  24. An electrochemical platform for localized pH control on demand. 
    Fomina, N., Johnson, C.A., Maruniak, A., Bahrampour, S., Lang, C., Davis, R.W., Kavusi, S. and Ahmad, H. Lab on a Chip 16.12 (2016): 2236-2244. doi: 10.1039/c6lc00421k.

  25. Nucleotide-specific contrast for DNA sequencing by electron spectroscopy. 
    Mankos, M., Persson, H.H., N’Diaye, A.T., Shadman, K., Schmid, A.K. and Davis, R.W. PLoS One 11.5 (2016): e0154707. doi: 10.1371/journal.pone.0154707.

  26. Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design. 
    Smith, J.D., Suresh, S., Schlecht, U., Wu, M., Wagih, O., Peltz, G., Davis, R.W., Steinmetz, L.M., Parts, L. and St. Onge, R.P. Genome biology 17 (2016): 1-16. doi: 10.1186/s13059-016-0900-9.

  27. Integrating cell phone imaging with magnetic levitation (i-LEV) for label-free blood analysis at the point-of-living. 
    Baday, M., Calamak, S., Durmus, N.G., Davis, R.W., Steinmetz, L.M. and Demirci, U. Small 12.9 (2016): 1222-1229. doi: 10.1002/smll.201501845.

  28. Next-generation molecular testing of newborn dried blood spots for cystic fibrosis. 
    Lefterova, M.I., Shen, P., Odegaard, J.I., Fung, E., Chiang, T., Peng, G., Davis, R.W., Wang, W., Kharrazi, M., Schrijver, I. and Scharfe, C. The Journal of Molecular Diagnostics 18.2 (2016): 267-282. doi: 10.1016/j.jmoldx.2015.11.005.

  29. Nanoelectronic three-dimensional (3D) nanotip sensing array for real-time, sensitive, label-free sequence specific detection of nucleic acids. 
    Esfandyarpour, R., Yang, L., Koochak, Z., Harris, J.S. and Davis, R.W. Biomedical microdevices 18 (2016): 1-10. doi: 10.1007/s10544-016-0032-8.

  30. Fully integrated wearable sensor arrays for multiplexed in situ perspiration analysis. 
    Gao, W., Emaminejad, S., Nyein, H.Y.Y., Challa, S., Chen, K., Peck, A., Fahad, H.M., Ota, H., Shiraki, H., Kiriya, D. and Lien, D.H. Nature 529.7587 (2016): 509-514. doi: 10.1038/nature16521.

  31. A rapid, high-quality, cost-effective, comprehensive and exapandable targeted next-generation sequencing assay for inherited heart diseases. 
    Wilson, K.D., Shen, P., Fung, E., Karakikes, I., Zhang, A., InanlooRahatloo, K., Odegaard, J., Sallam, K., Davis, R.W., Lui, G.K. and Ashley, E.A. Circulation research 117.7 (2015): 603-611. doi: 10.1161/circresaha.115.306723.

  32. Multitarget, quantitative nanoplasmonic electrical field-enhanced resonating device (NE2RD) for diagnostics. 
    Inci, F., Filippini, C., Baday, M., Ozen, M.O., Calamak, S., Durmus, N.G., Wang, S., Hanhauser, E., Hobbs, K.S., Juillard, F. and Kuang, P.P. Proceedings of the National Academy of Sciences 112.32 (2015): E4354-E4363. doi: 10.1073/pnas.1510824112.

  33. Magnetic levitation of single cells. 
    Durmus, N.G., Tekin, H.C., Guven, S., Sridhar, K., Arslan Yildiz, A., Calibasi, G., Ghiran, I., Davis, R.W., Steinmetz, L.M. and Demirci, U. Proceedings of the National Academy of Sciences 112.28 (2015): E3661-E3668. doi: 10.1073/pnas.1509250112.

  34. RASA: Robust alternative splicing analysis for human transcriptome arrays. 
    Seok, J., Xu, W., Davis, R.W. and Xiao, W. Scientific reports 5.1 (2015): 11917. doi: 10.1038/srep11917.

  35. LBP19: Extended coverage by next generation sequencing methods refines the characterization of the common and well documented hla alleles. 
    Fernandez-Vina, M.A., Wang, C., Krishnakumar, S., Levinson, D.F., Davis, R.W. and Mindrinos, M. Human Immunology 76.4 (2015): 226. doi: 10.1016/j.humimm.2015.01.051.

  36. Integrating cell phone imaging with magnetic levitation (i-LEV) for label-free blood analysis at the point-of-living. 
    Baday, M., Calamak, S., Durmus, N.G., Davis, R.W., Steinmetz, L.M. and Demirci, U. Small 12.9 (2016): 1222-1229. doi:10.1002/smll.201501845. Epub 2015 Nov 2.

  37. A simple method for encapsulating single cells in alginate microspheres allows for direct PCR and whole genome amplification. 
    Bigdeli, S., Dettloff, R.O., Frank, C.W., Davis, R.W. and Crosby, L.D. PLoS One 10.2 (2015): e0117738. doi:10.1371/journal.pone.0117738. eCollection 2015.

  38. Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and development. 
    Becker, E., Liu, Y., Lardenois, A., Walther, T., Horecka, J., Stuparevic, I., Law, M.J., Lavigne, R., Evrard, B., Demougin, P. and Riffle, M. Journal of proteomics 119 (2015): 30-44. doi: 10.1016/j.jprot.2015.01.015.

  39. Tunable control of antibody immobilization using electric field. 
    Emaminejad, S., Javanmard, M., Gupta, C., Chang, S., Davis, R.W. and Howe, R.T. Proceedings of the National Academy of Sciences 112.7 (2015): 1995-1999. doi: 10.1073/pnas.1424592112. Epub 2015 Feb 3.

  40. Multielectrode sensing for extraction of signal from noise in impedance cytometry. 
    Emaminejad, S., Talebi, S., Davis, R.W. and Javanmard, M. IEEE Sensors Journal 15.5 (2015): 2715-2716. doi: 10.1109/jsen.2015.2389224.

  41. Mice are not men. W 
    Warren, H.S., Tompkins, R.G., Moldawer, L.L., Seok, J., Xu, W., Mindrinos, M.N., Maier, R.V., Xiao, W. and Davis, R.W. Proceedings of the National Academy of Sciences 112.4 (2015): E345-E345. doi: 10.1073/pnas.1414857111. Epub 2014 Dec 24.

  42. The conserved histone deacetylase Rpd3 and its DNA binding subunit Ume6 control dynamic transcript architecture during mitotic growth and meiotic development. 
    Lardenois, A., Stuparevic, I., Liu, Y., Law, M.J., Becker, E., Smagulova, F., Waern, K., Guilleux, M.H., Horecka, J., Chu, A. and Kervarrec, C. Nucleic acids research 43.1 (2015): 115-128. doi: 10.1093/nar/gku1185. Epub 2014 Dec 3.

  43. Single cell mutational analysis of PIK3CA in circulating tumor cells and metastases in breast cancer reveals heterogeneity, discordance, and mutation persistence in cultured disseminated tumor cells from bone marrow. 
    Deng, G., Krishnakumar, S., Powell, A.A., Zhang, H., Mindrinos, M.N., Telli, M.L., Davis, R.W. and Jeffrey, S.S. BMC cancer 14 (2014): 1-12. doi: 10.1186/1471-2407-14-456.

  44. Detecting differential protein expression in large-scale population proteomics. 
    Ryu, S.Y., Qian, W.J., Camp, D.G., Smith, R.D., Tompkins, R.G., Davis, R.W. and Xiao, W. Bioinformatics 30.19 (2014): 2741-2746. doi: 10.1093/bioinformatics/btu341. Epub 2014 Jun 12.

  45. Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20. 
    Kuehl, J.V., Price, M.N., Ray, J., Wetmore, K.M., Esquivel, Z., Kazakov, A.E., Nguyen, M., Kuehn, R., Davis, R.W., Hazen, T.C. and Arkin, A.P. MBio 5.3 (2014): 10-1128. doi: 10.1128/mBio.01041-14.

  46. Multiplexed actuation using ultra dielectrophoresis for proteomics applications: a comprehensive electrical and electrothermal design methodology. 
    Emaminejad, S., Dutton, R.W., Davis, R.W. and Javanmard, M. Lab on a Chip 14.12 (2014): 2105-2114. doi: 10.1039/c4lc00036f. Epub 2014 May 7.

  47. Targeted and highly multiplexed detection of microorganisms by employing an ensemble of molecular probes. 
    Xu, W., Krishnakumar, S., Miranda, M., Jensen, M.A., Fukushima, M., Palm, C., Fung, E., Davis, R.W., St. Onge, R.P. and Hyman, R.W. Applied and Environmental Microbiology 80.14 (2014): 4153-4161. doi: 10.1128/AEM.00666-14. Epub 2014 May 2.

  48. Mapping the cellular response to small molecules using chemogenomic fitness signatures. 
    Lee, A.Y., St. Onge, R.P., Proctor, M.J., Wallace, I.M., Nile, A.H., Spagnuolo, P.A., Jitkova, Y., Gronda, M., Wu, Y., Kim, M.K. and Cheung-Ong, K. Science 344.6180 (2014): 208-211. doi: 10.1126/science.1250217.  

  49. A functional screen for copper homeostasis genes identifies a pharmacologically tractable cellular system. 
    Schlecht, U., Suresh, S., Xu, W., Aparicio, A.M., Chu, A., Proctor, M.J., Davis, R.W., Scharfe, C. and St Onge, R.P. BMC genomics 15 (2014): 1-14. doi: 10.1186/1471-2164-15-263.

  50. The 50:50 method for PCR-based seamless genome editing in yeast. 
    Horecka, J. and Davis, R.W. Yeast 31.3 (2014): 103-112. doi: 10.1002/yea.2992. Epub 2013 Dec 13.

  51. IpO: plasmids and methods for simplified, PCR-based DNA transplant in yeast. 
    Horecka, J., Chu, A.M. and Davis, R.W. Yeast 31.5 (2014): 185-193. doi: 10.1002/yea.3006. Epub 2014 Mar 20.

  52. Scan statistics analysis for detection of introns in time-course tiling array data. 
    Reiner-Benaim, A., Davis, R.W. and Juneau, K. Statistical applications in genetics and molecular biology 13.2 (2014): 173-190. doi: 10.1515/sagmb-2013-0038.

  53. A novel low energy electron microscope for DNA sequencing and surface analysis. 
    Mankos, M., Shadman, K., Persson, H.H.J., N’Diaye, A.T., Schmid, A.K. and Davis, R.W. Ultramicroscopy 145 (2014): 36-49. doi: 10.1016/j.ultramic.2014.01.007. Epub 2014 Jan 31.

  54. Digital microfluidic assay for protein detection. 
    Mok, J., Mindrinos, M.N., Davis, R.W. and Javanmard, M. Proceedings of the National Academy of Sciences 111.6 (2014): 2110-2115. doi: 10.1073/pnas.1323998111. Epub 2014 Jan 21.

  55. Molecular indexing enables quantitative targeted RNA sequencing and reveals poor efficiencies in standard library preparations. 
    Fu, G.K., Xu, W., Wilhelmy, J., Mindrinos, M.N., Davis, R.W., Xiao, W. and Fodor, S.P. Proceedings of the National Academy of Sciences 111.5 (2014): 1891-1896. doi: 10.1073/pnas.1323732111. Epub 2014 Jan 21.

  56. Nanoelectronic impedance detection of target cells. 
    Esfandyarpour, R., Javanmard, M., Koochak, Z., Harris, J.S. and Davis, R.W. Biotechnology and bioengineering 111.6 (2014): 1161-1169. doi: 10.1002/bit.25171. Epub 2013 Dec 28.

  57. Computational identification and analysis of orphan assembly-line polyketide synthases. 
    O'brien, R.V., Davis, R.W., Khosla, C. and Hillenmeyer, M.E. The Journal of antibiotics 67.1 (2014): 89-97. doi: 10.1038/ja.2013.125. Epub 2013 Dec 4.

  58. Ceftriaxone increases glutamate uptake and reduces striatal tyrosine hydroxylase loss in 6-OHDA Parkinson's model. 
    Chotibut, T., Davis, R.W., Arnold, J.C., Frenchek, Z., Gurwara, S., Bondada, V., Geddes, J.W. and Salvatore, M.F. Molecular neurobiology 49 (2014): 1282-1292. doi: 10.1007/s12035-013-8598-0. Epub 2013 Dec 3.

  59. PITPs as targets for selectively interfering with phosphoinositide signaling in cells. 
    Nile, A.H., Tripathi, A., Yuan, P., Mousley, C.J., Suresh, S., Wallace, I.M., Shah, S.D., Pohlhaus, D.T., Temple, B., Nislow, C. and Giaever, G. Nature chemical biology 10.1 (2014): 76-84. doi: 10.1038/nchembio.1389. Epub 2013 Nov 24.

  60. Diversity of the vaginal microbiome correlates with preterm birth.  
    Hyman, R.W., Fukushima, M., Jiang, H., Fung, E., Rand, L., Johnson, B., Vo, K.C., Caughey, A.B., Hilton, J.F., Davis, R.W. and Giudice, L.C. Reproductive sciences 21.1 (2014): 32-40.

  61. Label-free electronic probing of nucleic acids and proteins at the nanoscale using the nanoneedle biosensor. 
    Esfandyarpour, R., Javanmard, M., Koochak, Z., Esfandyarpour, H., Harris, J.S. and Davis, R.W. Biomicrofluidics 7.4 (2013). doi: 10.1063/1.4817771. eCollection 2013. Erratum in: Biomicrofluidics. 2014;8(2):029901.

  62. Treadmill exercise inhibits apoptotic neuronal cell death with suppressed vascular endothelial growth factor expression in the retinas of the diabetic rats. 
    Ji, E.S., Ko, I.G., Cho, J.W., Davis, R.W., Hwang, G.Y., Jee, Y.S. and Lim, B.V. Journal of exercise rehabilitation 9.3 (2013): 348. doi: 10.12965/jer.130043. eCollection 2013.

  63. Simulation and fabrication of a new novel 3D injectable biosensor for high throughput genomics and proteomics in a lab-on-a-chip device. 
    Esfandyarpour, R., Esfandyarpour, H., Harris, J.S. and Davis, R.W. Nanotechnology 24.46 (2013): 465301. doi: 10.1088/0957-4484/24/46/465301. Epub 2013 Oct 22.

  64. To study human inflammatory diseases in humans. 
    Tompkins, R.G., Warren, H.S., Mindrinos, M.N., Xiao, W. and Davis, R.W. Proceedings of the National Academy of Sciences 110.36 (2013): E3371-E3371.

  65. Of men, not mice, and inflammation. 
    Warren, H.S., Tompkins, R.G., Mindrinos, M.N., Xiao, W. and Davis, R.W. Proceedings of the National Academy of Sciences 110.34 (2013): E3151-E3151.

  66. The Sequencing Bead Array (SBA), a next-generation digital suspension array. 
    Akhras, M.S., Pettersson, E., Diamond, L., Unemo, M., Okamoto, J., Davis, R.W. and Pourmand, N. PLos one 8.10 (2013): e76696. doi: 10.1371/journal.pone.0076696. eCollection 2013.

  67. Determination of burn patient outcome by large-scale quantitative discovery proteomics. 
    Finnerty, C.C., Jeschke, M.G., Qian, W.J., Kaushal, A., Xiao, W., Liu, T., Gritsenko, M.A., Moore, R.J., Camp, D.G., Moldawer, L.L. and Elson, C. Critical care medicine 41.6 (2013): 1421-1434. doi: 10.1097/CCM.0b013e31827c072e.

  68. Direct oligonucleotide synthesis onto super-paramagnetic beads. 
    Jensen, M.A., Akhras, M.S., Fukushima, M., Pourmand, N. and Davis, R.W. Journal of biotechnology 167.4 (2013): 448-453. doi: 10.1016/j.jbiotec.2013.08.006.

  69. Progress toward an aberration-corrected low energy electron microscope for DNA sequencing and surface analysis.  
    Mankos, M., Shadman, K., Schmid, A.K., Persson, H.H. and Davis, R.W. Journal of Vacuum Science & Technology B 30.6 (2012).

  70. Multiplex target capture with double-stranded DNA probes.  
    Shen, P., Wang, W., Chi, A.K., Fan, Y., Davis, R.W. and Scharfe, C. Genome medicine 5 (2013): 1-8.

  71. Trauma-associated human neutrophil alterations revealed by comparative proteomics profiling.  
    Zhou, J.Y., Krovvidi, R.K., Gao, Y., Gao, H., Petritis, B.O., De, A.K., Miller‐Graziano, C.L., Bankey, P.E., Petyuk, V.A., Nicora, C.D. and Clauss, T.R. PROTEOMICS–Clinical Applications 7.7-8 (2013): 571-583. doi: 10.1002/prca.201200109.

  72. Rare variant detection using family-based sequencing analysis.  
    Peng, G., Fan, Y., Palculict, T.B., Shen, P., Ruteshouser, E.C., Chi, A.K., Davis, R.W., Huff, V., Scharfe, C. and Wang, W. Proceedings of the National Academy of Sciences 110.10 (2013): 3985-3990. doi: 10.1073/pnas.1222158110. Epub 2013 Feb 20.

  73. Genomic Responses in mouse models poorly mimic human inflammatory diseases.  
    Seok, J., Warren, H.S., Cuenca, A.G., Mindrinos, M.N., Baker, H.V., Xu, W., Richards, D.R., McDonald-Smith, G.P., Gao, H., Hennessy, L. and Finnerty, C.C. Proceedings of the National Academy of Sciences 110.9 (2013): 3507-3512. doi: 10.1073/pnas.1222878110. Epub 2013 Feb 11.

  74. Microneedle Biosensor: A Method for Direct Label-free Real Time Protein Detection.  
    Esfandyarpour, R., Esfandyarpour, H., Javanmard, M., Harris, J.S. and Davis, R.W. Sensors and Actuators B: Chemical 177 (2013): 848-855.

  75. Smart surface for elution of protein-protein bound particles: nanonewton dielectrophoretic forces using atomic layer deposited oxides.  
    Emaminejad, S., Javanmard, M., Dutton, R.W. and Davis, R.W. Analytical chemistry 84.24 (2012): 10793-10801. doi: 10.1021/ac302857z. Epub 2012 Dec 6

  76. Microfluidic diagnostic tool for the developing world: contactless impedance flow cytometry.  
    Emaminejad, S., Javanmard, M., Dutton, R.W. and Davis, R.W. Lab on a Chip 12.21 (2012): 4499-4507.  

  77. Cationic amphiphilic drugs are potent inhibitors of yeast sporulation.  
    Schlecht, U., St. Onge, R.P., Walther, T., Francois, J.M. and Davis, R.W. (2012)

  78. Control of DNA Capture by Nanofluidic Transistors.  
    Paik, K.H., Liu, Y., Tabard-Cossa, V., Waugh, M.J., Huber, D.E., Provine, J., Howe, R.T., Dutton, R.W. and Davis, R.W. ACS nano 6.8 (2012): 6767-6775.

  79. Coding SNPs as intrinsic markers for sample tracking in large-scale transcriptome studies.  
    Xu, W., Gao, H., Seok, J., Wilhelmy, J., Mindrinos, M.N., Davis, R.W. and Xiao, W. Biotechniques 52.6 (2012): 386-388.

  80. Multiplex assay for condition-dependent changes in protein-protein interactions.  
    Schlecht, U., Miranda, M., Suresh, S., Davis, R.W. and St. Onge, R.P. Proceedings of the National Academy of Sciences 109.23 (2012): 9213-9218.

  81. High-throughput, high-fidelity HLA genotyping with deep sequencing.  
    Wang, C., Krishnakumar, S., Wilhelmy, J., Babrzadeh, F., Stepanyan, L., Su, L.F., Levinson, D., Fernandez-Viña, M.A., Davis, R.W., Davis, M.M. and Mindrinos, M. Proceedings of the National Academy of Sciences 109.22 (2012): 8676-8681.

  82. Single cell profiling of circulating tumor cells: transcriptional heterogeneity and diversity from breast cancer cell lines.  
    Powell, A.A., Talasaz, A.H., Zhang, H., Coram, M.A., Reddy, A., Deng, G., Telli, M.L., Advani, R.H., Carlson, R.W., Mollick, J.A. and Sheth, S. PloS one 7.5 (2012): e33788.

  83. Whole-genome sequencing of the efficient industrial fuel-ethanol fermentative Saccharomyces cerevisiae strain CAT-1.  
    Babrzadeh, F., Jalili, R., Wang, C., Shokralla, S., Pierce, S., Robinson-Mosher, A., Nyren, P., Shafer, R.W., Basso, L.C., de Amorim, H.V. and de Oliveira, A.J. Molecular genetics and genomics 287 (2012): 485-494.

  84. A rapid, cost-effective method of assembly and purification of synthetic DNA probes >100 bp.  
    Jensen, M.A., Jauregui, L. and Davis, R.W. Plos one 7.4 (2012): e34373.

  85. Benchmarking outcomes in the critically injured trauma patient and the effect of implementing standard operating procedures.  
    Cuschieri, J., Johnson, J.L., Sperry, J., West, M.A., Moore, E.E., Minei, J.P., Bankey, P.E., Nathens, A.B., Cuenca, A.G., Efron, P.A. and Hennessy, L. Annals of surgery 255.5 (2012): 993-999.

  86. JETTA: Junction and Exon Toolkits for Transcriptome Analysis. 
    Seok, J., Xu, W., Gao, H., Davis, R.W. and Xiao, W. Bioinformatics 28.9 (2012): 1274-1275.

  87. Molecular probe technology detects bacteria without culture. 
    Hyman, R.W., St Onge, R.P., Kim, H., Tamaresis, J.S., Miranda, M., Aparicio, A.M., Fukushima, M., Pourmand, N., Giudice, L.C. and Davis, R.W. BMC microbiology 12 (2012): 1-10.

  88. Improvement in cell capture throughput using parallel bioactivated microfluidic channels. 
    Javanmard, M., Babrzadeh, F., Nyrén, P. and Davis, R.W. Biomedical microdevices 14 (2012): 625-629.

  89. Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research.  
    Seok, J., Xu, W., Jiang, H., Davis, R.W. and Xiao, W. PloS one 7.2 (2012): e31440.

  90. Transient striatal GLT-1 blockade increases EAAC1 expression, glutamate reuptake, and decreases tyrosine hydroxylase phosphorylation at ser(19).  
    Salvatore, M.F., Davis, R.W., Arnold, J.C. and Chotibut, T. Experimental neurology 234.2 (2012): 428-436.

  91. Use of negative dielectrophoresis for selective elution of protein-bound particles. 
    Javanmard, M., Emaminejad, S., Dutton, R.W. and Davis, R.W. Analytical chemistry 84.3 (2012): 1432-1438.

  92. The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer.  
    Hyman, R.W., Herndon, C.N., Jiang, H., Palm, C., Fukushima, M., Bernstein, D., Vo, K.C., Zelenko, Z., Davis, R.W. and Giudice, L.C. Journal of assisted reproduction and genetics 29 (2012): 105-115.

  93. A global perspective of the genetic basis for carbonyl stress resistance. 
    Hoon, S., Gebbia, M., Costanzo, M., Davis, R.W., Giaever, G. and Nislow, C. G3: Genes| Genomes| Genetics 1.3 (2011): 219-231.

  94. High-throughput VDJ sequencing for quantification of minimal residual disease in chronic lymphocytic leukemia and immune reconstitution assessment.  
    Logan, A.C., Gao, H., Wang, C., Sahaf, B., Jones, C.D., Marshall, E.L., Buño, I., Armstrong, R., Fire, A.Z., Weinberg, K.I. and Mindrinos, M. Proceedings of the National Academy of Sciences 108.52 (2011): 21194-21199.

  95. Evidence-based annotation of gene function in Shewanella oneidensis MR-1 using genome-wide fitness profiling across 121 conditions.  
    Deutschbauer, A., Price, M.N., Wetmore, K.M., Shao, W., Baumohl, J.K., Xu, Z., Nguyen, M., Tamse, R., Davis, R.W. and Arkin, A.P. PLoS genetics 7.11 (2011): e1002385.

  96. A genomic storm in critically injured humans.  
    Xiao, W., Mindrinos, M.N., Seok, J., Cuschieri, J., Cuenca, A.G., Gao, H., Hayden, D.L., Hennessy, L., Moore, E.E., Minei, J.P. and Bankey, P.E. Journal of Experimental Medicine 208.13 (2011): 2581-2590.

  97. The Human OligoGenome Resource: a database of oligonucleotide capture probes for resequencing target regions across the human genome.  
    Newburger, D.E., Natsoulis, G., Grimes, S., Bell, J.M., Davis, R.W., Batzoglou, S. and Ji, H.P. Nucleic acids research 40.D1 (2012): D1137-D1143. Epub 2011 Nov 18.

  98. Dissecting inflammatory complications in critically injured patients by within-patient gene expression changes: a longitudinal clinical genomics study.  
    Desai KH, Tan CS, Leek JT, Maier RV, Tompkins RG, Storey JD; Inflammation and the Host Response to Injury Large-Scale Collaborative Research Program.  PLoS Med. 2011 Sep;8(9):e1001093. Epub 2011 Sep 13.

  99. Correction to cell-sirected integration into three-dimensional lipid-silica nanostructured matrices. 
    Harper, J.C., Khripin, C.Y., Carnes, E.C., Ashley, C.E., Lopez, D.M., Savage, T., Jones, H.D., Davis, R.W., Nunez, D.E., Brinker, L.M. and Kaehr, B. ACS Nano 5.3 (2011): 2412-2412.

  100. Distinctive responsiveness to stromal signaling accompanies histologic grade programming of cancer cells. 
    Luciani, M.G., Seok, J., Sayeed, A., Champion, S., Goodson, W.H., Jeffrey, S.S., Xiao, W., Mindrinos, M., Davis, R.W. and Dairkee, S.H. PLoS One 6.5 (2011): e20016.

  101. The Automated Cell: Compound and Environment Screening System (ACCESS) for Chemogenomic Screening. 
    Proctor, M., Urbanus, M.L., Fung, E.L., Jaramillo, D.F., Davis, R.W., Nislow, C. and Giaever, G. Yeast Systems Biology: Methods and Protocols (2011): 239-269. [PubMed]

  102. Human transcriptome array for high-throughput clinical studies. 
    Xu, W., Seok, J., Mindrinos, M.N., Schweitzer, A.C., Jiang, H., Wilhelmy, J., Clark, T.A., Kapur, K., Xing, Y., Faham, M. and Storey, J.D. Proceedings of the National Academy of Sciences 108.9 (2011): 3707-3712. PMCID: 3048146. [PubMed]

  103. Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing. 
    Wang, W., Shen, P., Thiyagarajan, S., Lin, S., Palm, C., Horvath, R., Klopstock, T., Cutler, D., Pique, L., Schrijver, I. and Davis, R.W. Nucleic acids research 39.1 (2011): 44-58. PMCID: 3017602. [PubMed]

  104. High-quality DNA sequence capture of 524 disease candidate genes. 
    Shen, P., Wang, W., Krishnakumar, S., Palm, C., Chi, A.K., Enns, G.M., Davis, R.W., Speed, T.P., Mindrinos, M.N. and Scharfe, C. Proceedings of the National Academy of Sciences 108.16 (2011): 6549-6554. PMCID: 3080966. [PubMed]

  105. Execution of the meiotic noncoding RNA expression program and the onset of gametogenesis in yeast require the conserved exosome subunit Rrp6. 
    Lardenois, A., Liu, Y., Walther, T., Chalmel, F., Evrard, B., Granovskaia, M., Chu, A., Davis, R.W., Steinmetz, L.M. and Primig, M. Proceedings of the National Academy of Sciences 108.3 (2011): 1058-1063. PMCID: 3024698. [PubMed]

  106. Cell-directed integration into three-dimensional lipid-silica nanostructured matrices. 
    Harper, J.C., Khirpin, C.Y., Carnes, E.C., Ashley, C.E., Lopez, D.M., Savage, T., Jones, H.D., Davis, R.W., Nunez, D.E., Brinker, L.M. and Kaehr, B. ACS nano 4.10 (2010): 5539-5550.

  107. Identification and interpretation of longitudinal gene expression changes in trauma. 
    Rajicic, N., Cuschieri, J., Finkelstein, D.M., Miller-Graziano, C.L., Hayden, D., Moldawer, L.L., Moore, E., O'Keefe, G., Pelik, K., Warren, H.S. and Schoenfeld, D.A. PloS one 5.12 (2010): e14380.

  108. Analysis of factorial time-course microarrays with application to a clinical study of burn injury. 
    Zhou B, Xu W, Herndon D, Tompkins R, Davis R, Xiao W, Wong WH, Toner M, Warren HS, Schoenfeld DA, Rahme L, McDonald-Smith GP, Hayden D, Mason P, Fagan S, Yu YM, Cobb JP, Remick DG, Mannick JA, Lederer JA, Gamelli RL, Silver GM, West MA, Shapiro MB, Smith R, Camp DG, 2nd, Qian W, Storey J, Mindrinos M, Tibshirani R, Lowry S, Calvano S, Chaudry I, Cohen M, Moore EE, Johnson J, Moldawer LL, Baker HV, Efron PA, Balis UG, Billiar TR, Ochoa JB, Sperry JL, Miller-Graziano CL, De AK, Bankey PE, Finnerty CC, Jeschke MG, Minei JP, Arnoldo BD, Hunt JL, Horton J, Brownstein B, Freeman B, Maier RV, Nathens AB, Cuschieri J, Gibran N, Klein M, O'Keefe G. Proc Natl Acad Sci (2010):9923-8. PMCID: 2890487. [PubMed]

  109. Predicting patient survival from longitudinal gene expression. 
    Zhang, Y., Tibshirani, R.J. and Davis, R.W. Statistical applications in genetics and molecular biology 9.1 (2010). PMCID: 3004784. [PubMed]

  110. High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets. 
    Wang, C., Sanders, C.M., Yang, Q., Schroeder Jr, H.W., Wang, E., Babrzadeh, F., Gharizadeh, B., Myers, R.M., Hudson Jr, J.R., Davis, R.W. and Han, J. Proceedings of the National Academy of Sciences 107.4 (2010): 1518-1523. PMCID: 2824416. [PubMed]

  111. Knowledge-based analysis of microarrays for the discovery of transcriptional regulation relationships. 
    Seok, J., Kaushal, A., Davis, R.W. and Xiao, W. BMC bioinformatics 11 (2010): 1-8. PMCID: 3009543. [PubMed]

  112. A universal TagModule collection for parallel genetic analysis of microorganisms. 
    Oh, J., Fung, E., Price, M.N., Dehal, P.S., Davis, R.W., Giaever, G., Nislow, C., Arkin, A.P. and Deutschbauer, A. Nucleic acids research 38.14 (2010): e146-e146. PMCID: 2919733. [PubMed]

  113. Gene annotation and drug target discovery in Candida albicans with a tagged transposon mutant collection. 
    Oh, J., Fung, E., Schlecht, U., Davis, R.W., Giaever, G., St. Onge, R.P., Deutschbauer, A. and Nislow, C. PLoS pathogens 6.10 (2010): e1001140. PMCID: 2951378. [PubMed]

  114. Sensitive giant magnetoresistive-based immunoassay for multiplex mycotoxin detection. 
    Mak, A.C., Osterfeld, S.J., Yu, H., Wang, S.X., Davis, R.W., Jejelowo, O.A. and Pourmand, N. Biosensors and Bioelectronics 25.7 (2010): 1635-1639. PMCID: 2947153. [PubMed]

  115. A molecular inversion probe assay for detecting alternative splicing. 
    Lin, S., Wang, W., Palm, C., Davis, R.W. and Juneau, K. BMC genomics 11 (2010): 11-14. PMCID: 3022918. [PubMed]

  116. Clinical microfluidics for neutrophil genomics and proteomics. 
    Kotz, K.T., Xiao, W., Miller-Graziano, C., Qian, W.J., Russom, A., Warner, E.A., Moldawer, L.L., De, A., Bankey, P.E., Petritis, B.O. and Camp, D.G. Nature medicine 16.9 (2010): 1042-1047. [PubMed]

  117. Gas-phase cleavage and dephosphorylation of universal linker-bound oligodeoxynucleotides. 
    Jensen, M.A., Anderson, K.M. and Davis, R.W. Nucleosides Nucleotides and Nucleic Acids 29.11-12 (2010): 867-878. [PubMed]

  118. DMSO and betaine greatly improve amplification of GC-rich constructs in de novo synthesis. 
    Jensen, M.A., Fukushima, M. and Davis, R.W. PloS one 5.6 (2010): e11024. PMCID: 2883997. [PubMed]

  119. Multiplex identification of microbes. 
    Hyman, R.W., St. Onge, R.P., Allen, E.A., Miranda, M., Aparicio, A.M., Fukushima, M. and Davis, R.W. Applied and environmental microbiology 76.12 (2010): 3904-3910. PMCID: 2893500. [PubMed]

  120. A direct comparison of the KB Basecaller and phred for identifying the bases from DNA sequencing using chain termination chemistry. 
    Hyman, R.W., Jiang, H., Fukushima, M. and Davis, R.W. BMC research notes 3 (2010): 1-4. PMCID: 3020662. [PubMed]

  121. Systematic analysis of genome-wide fitness data in yeast reveals novel gene function and drug action. 
    Hillenmeyer, M.E., Ericson, E., Davis, R.W., Nislow, C., Koller, D. and Giaever, G. Genome biology, 11 (2010): 1-17. PMCID: 2864570. [PubMed]

  122. Semi-automated library preparation for high-throughput DNA sequencing platforms. 
    Farias-Hesson, E., Erikson, J., Atkins, A., Shen, P., Davis, R.W., Scharfe, C. and Pourmand, N. BioMed Research International 2010.1 (2010): 617469. PMCID: 2896710. [PubMed]

  123. Sequential use of transcriptional profiling, expression quantitative trait mapping, and gene association implicates MMP20 in human kidney aging. 
    Wheeler, H.E., Metter, E.J., Tanaka, T., Absher, D., Higgins, J., Zahn, J.M., Wilhelmy, J., Davis, R.W., Singleton, A., Myers, R.M. and Ferrucci, L. PLoS Genetics 5.10 (2009): e1000685. PMCID: 2752811. [PubMed]

  124. Isolating highly enriched populations of circulating epithelial cells and other rare cells from blood using a magnetic sweeper device. 
    Talasaz, A.H., Powell, A.A., Huber, D.E., Berbee, J.G., Roh, K.H., Yu, W., Xiao, W., Davis, M.M., Pease, R.F., Mindrinos, M.N. and Jeffrey, S.S. Proceedings of the National Academy of Sciences 106.10 (2009): 3970-3975. PMCID: 2645911. [PubMed]

  125. Whole genome survey of coding SNPs reveals a reproducible pathway determinant of Parkinson disease. 
    Srinivasan, B.S., Doostzadeh, J., Absalan, F., Mohandessi, S., Jalili, R., Bigdeli, S., Wang, J., Mahadevan, J., Lee, C.L., Davis, R.W. and William Langston, J. Human mutation 30.2 (2009): 228-238. PMCID: 2793088. [PubMed]

  126. A dynamic network of transcription in LPS-treated human subjects. 
    Seok, J., Xiao, W., Moldawer, L.L., Davis, R.W. and Covert, M.W. BMC Systems Biology 3 (2009): 1-14. PMCID: 2729748. [PubMed]

  127. Mapping gene associations in human mitochondria using clinical disease phenotypes. 
    Scharfe, C., Lu, H.H.S., Neuenburg, J.K., Allen, E.A., Li, G.C., Klopstock, T., Cowan, T.M., Enns, G.M. and Davis, R.W. PLoS computational biology 5.4 (2009): e1000374. PMCID: 2668170. [PubMed]

  128. Meiotic recombination generates rich diversity in NK cell receptor genes, alleles, and haplotypes. 
    Norman, P.J., Abi-Rached, L., Gendzekhadze, K., Hammond, J.A., Moesta, A.K., Sharma, D., Graef, T., McQueen, K.L., Guethlein, L.A., Carrington, C.V. and Chandanayingyong, D. Genome research 19.5 (2009): 757-769. PMCID: 2675964. [PubMed]

  129. A genome-wide screen for regulators of TORC1 in response to amino acid starvation reveals a conserved Npr2/3 complex. 
    Neklesa, T.K. and Davis, R.W. PLoS genetics 5.6 (2009): e1000515. PMCID: 2686269. [PubMed]

  130. Alternative splicing of PTC7 in Saccharomyces cerevisiae determines protein localization. 
    Juneau, K., Nislow, C. and Davis, R.W. Genetics 183.1 (2009): 185-194. PMCID: 2746143. [PubMed]

  131. Electrical detection of protein biomarkers using bioactivated microfluidic channels. 
    Javanmard, M., Talasaz, A.H., Nemat-Gorgani, M., Pease, F., Ronaghi, M. and Davis, R.W. Lab on a Chip 9.10 (2009): 1429-1434. PMCID: 2778468. [PubMed]

  132. Electrical Detection of Proteins and DNA using Bioactivated Microfluidic Channels: Theoretical and Experimental Considerations. 
    Javanmard, M., Esfandyarpour, H., Pease, F. and Davis, R.W. Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures Processing, Measurement, and Phenomena 27.6 (2009): 3099-3103. PMCID: 2868200. [PubMed]

  133. A Microfluidic Platform for Characterization of Protein-Protein Interactions. 
    Javanmard, M., Talasaz, A.H., Nemat-Gorgani, M., Huber, D.E., Pease, F., Ronaghi, M. and Davis, R.W. IEEE sensors journal 9.8 (2009): 883-891. PMCID: 2868195. [PubMed]

  134. Multiplex protein assays based on real-time magnetic nanotag sensing. 
    Osterfeld, S.J., Yu, H., Gaster, R.S., Caramuta, S., Xu, L., Han, S.J., Hall, D.A., Wilson, R.J., Sun, S., White, R.L. and Davis, R.W. Proceedings of the National Academy of Sciences 105.52 (2008): 20637-20640. PMCID: 2602607. [PubMed]

  135. High-resolution, in vivo magnetic resonance imaging of Drosophila at 18.8 Tesla. 
    Null, B., Liu, C.W., Hedehus, M., Conolly, S. and Davis, R.W. PLoS One 3.7 (2008): e2817. PMCID: 2474967. [PubMed], [Publisher Full Text]

  136. Superoxide anions regulate TORC1 and its ability to bind Fpr1:rapamycin complex. 
    Neklesa, T.K. and Davis, R.W. Proceedings of the National Academy of Sciences 105.39 (2008): 15166-15171. PMCID: 2567509. [PubMed]

  137. A comprehensive assay for targeted multiplex amplification of human DNA sequences. 
    Krishnakumar S, Zheng J, Wilhelmy J, Faham M, Mindrinos M, Davis R. Proc Natl Acad Sci. 105.27 (2008): 9296-301. [PubMed], [Publisher Full Text]

  138. Pervasive and persistent redundancy among duplicated genes in yeast. 
    Dean, E.J., Davis, J.C., Davis, R.W. and Petrov, D.A. PLoS genetics 4.7 (2008): e1000113. PMCID: 2440806. [PubMed], [Publisher Full Text]

  139. High throughput automated allele frequency estimation by pyrosequencing. 
    Doostzadeh, J., Shokralla, S., Absalan, F., Jalili, R., Mohandessi, S., Langston, J.W., Davis, R.W., Ronaghi, M. and Gharizadeh, B. PloS one 3.7 (2008): e2693. [PubMed], [Publisher Full Text]

  140. Conformational flexibility of a model protein upon immobilization on self-assembled monolayers. 
    Bigdeli, S., Talasaz, A.H., Ståhl, P., Persson, H.H., Ronaghi, M., Davis, R.W. and Nemat‐Gorgani, M. Biotechnology and bioengineering 100.1 (2008): 19-27. [PubMed], [Full Text PDF]

  141. The chemical genomic portrait of yeast: uncovering a phenotype for all genes. 
    Hillenmeyer, M.E., Fung, E., Wildenhain, J., Pierce, S.E., Hoon, S., Lee, W., Proctor, M., St. Onge, R.P., Tyers, M., Koller, D. and Altman, R.B. Science 320.5874 (2008): 362-365. PMCID: 2794835. [PubMed], [Publisher Full Text]

  142. Microfluidic leukocyte isolation for gene expression analysis in critically ill hospitalized patients. 
    Russom, A., Sethu, P., Irimia, D., Mindrinos, M.N., Calvano, S.E., Garcia, I., Finnerty, C., Tannahill, C., Abouhamze, A., Wilhelmy, J. and Lopez, M.C. Clinical chemistry 54.5 (2008): 891-900. [PubMed], [Publisher Full Text]

  143. Bisphenol A induces a profile of tumor aggressiveness in high-risk cells from breast cancer patients. 
    Dairkee, S.H., Seok, J., Champion, S., Sayeed, A., Mindrinos, M., Xiao, W., Davis, R.W. and Goodson, W.H. Cancer research 68.7 (2008): 2076-2080. [PubMed], [Publisher Full Text]

  144. An integrated platform of genomic assays reveals small-molecule bioactivities. 
    Hoon, S., M Smith, A., Wallace, I.M., Suresh, S., Miranda, M., Fung, E., Proctor, M., Shokat, K.M., Zhang, C., Davis, R.W. and Giaever, G. Nature chemical biology 4.8 (2008): 498-506. [PubMed], [Publisher Full Text]

  145. A pico-calorimetric method for DNA sequencing. 
    Esfandyarpour, H.; Pease, R.F.W.; Davis, R.W. J. Vac Sci. and Technol. B 26.2 (2008).

  146. Real Time Simulation of Pyrophosphate Concentration and Heat Detection in Thermosequencing. 
    Esfandyarpour, H. Zheng, B. Pease, RFW. Davis, R.W. Biomicrofluidics 2.1 (2008).

  147. Gate-Controlled Microfluidic with Magnetic Bead in DNA Sequencing. 
    Esfandyarpour, H. Davis R.W. invited and to appear in International Journal of Microfluidics and Nanofluidics.

  148. A system for multiplexed direct electrical detection of DNA synthesis. 
    Anderson, E.P., Daniels, J.S., Yu, H., Karhanek, M., Lee, T.H., Davis, R.W. and Pourmand, N. Sensors and Actuators B: Chemical 129.1 (2008): 79-86. PMCID: 2344141. [Full Text]  

  149. Multiplexed proximity ligation assays to profile putative plasma biomarkers relevant to pancreatic and ovarian cancer. 
    Fredriksson, S., Horecka, J., Terje Brustugun, O., Schlingemann, J., Koong, A.C., Tibshirani, R. and Davis, R.W. Clinical chemistry 54.3 (2008): 582-589. [PubMed], [Publisher Full Text]

  150. Interference of globin genes with biomarker discovery for allograft rejection in peripheral blood samples. 
    Li, L. Ying, L. Naesens, M. Xiao, W. Sigdel, T. Hsieh, S. Martin, J. Chen, R. Liu, K. Mindrinos, M. Davis, R. Sarwal, M. Physiol Genomics 32.2 (2008):190-7. [PubMed], [Publisher Full Text]

  151. High-throughput creation of a whole-genome collection of yeast knockout strains. 
    Chu, A.M. and Davis, R.W. Microbial Gene Essentiality: Protocols and Bioinformatics (2008): 205-220. [PubMed], [Publisher Full Text]

  152. Genome-wide analysis of barcoded Saccharomyces cerevisiae gene-deletion mutants in pooled cultures. 
    Pierce, S. E. Davis, R. W. Nislow, C. Giaever, G. Nat Protoc 2.11 (2007):2958-74. [PubMed], [Publisher Full Text]

  153. Diverse cellular functions of the Hsp90 molecular chaperone uncovered using systems approaches. 
    McClellan, A. J. Xia, Y. Deutschbauer, A. M. Davis, R. W. Gerstein, M. Frydman, J. Cell 131.1 (2007):121-35. [PubMed], [Publisher Full Text]

  154. Conformational flexibility of a model protein upon immobilization on selfassembled monolayers. 
    Bigdeli, S. Talasaz, A. H. Stahl, P. Persson, H. H. Ronaghi, M. Davis, R. W. Nemat-Gorgani, M. Biotechnol Bioeng. (2007). [PubMed], [Publisher]

  155. A novel catechol-based universal support for oligonucleotide synthesis. 
    Anderson, K.M., Jaquinod, L., Jensen, M.A., Ngo, N. and Davis, R.W. The Journal of Organic Chemistry 72.26 (2007): 9875-9880. [PubMed], [Publisher Full Text]

  156. Connector inversion probe technology: a powerful one-primer multiplex DNA amplification system for numerous scientific applications. 
    Akhras, M.S., Unemo, M., Thiyagarajan, S., Nyrén, P., Davis, R.W., Fire, A.Z. and Pourmand, N. PloS one 2.9 (2007): e915. [PubMed], [Publisher Full Text]

  157. A high-resolution atlas of nucleosome occupancy in yeast. 
    Lee, W. Tillo, D. Bray, N. Morse, R. H. Davis, R.W. Hughes, T. R. Nislow, C. Nat Genet 39(10):1235-44 (2007). [PubMed], [Publisher Full Text]

  158. Unusual selection on the KIR3DL1/S1 natural killer cell receptor in Africans. 
    Norman, P. J. Abi-Rached, L. Gendzekhadze, K. Korbel, D. Gleimer, M. Rowley, D. Bruno, D. Carrington, C.V. Chandanayingyong, D. Chang, Y.H. Crespi, C. Saruhan-Direskeneli, G. Fraser, P.A. Hameed, K. Kamkamidze, G. Koram, K. A. Layrisse, Z. Matamoros, N. Mila, J. Park, M. H. Pitchappan, R. M. Ramdath, D.D. Shiau, M.Y. Stephens, H.A. Struik, S. Verity, D.H. Vaughan, R.W. Tyan, D. Davis, R.W. Riley, E.M. Ronaghi, M. Parham, P. Nat Genet 39(9):1092-9 (2007). [PubMed], [Publisher Full Text]

  159. PathogenMip assay: a multiplex pathogen detection assay. 
    Akhras, M.S., Thiyagarajan, S., Villablanca, A.C., Davis, R.W., Nyrén, P. and Pourmand, N. PloS one 2.2 (2007): e223. [PubMed], [Publisher Full Text]

  160. Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. 
    Wei, W., McCusker, J.H., Hyman, R.W., Jones, T., Ning, Y., Cao, Z., Gu, Z., Bruno, D., Miranda, M., Nguyen, M. and Wilhelmy, J. Proceedings of the National Academy of Sciences 104.31 (2007): 12825-12830. [PubMed]

  161. Multigene amplification and massively parallel sequencing for cancer mutation discovery. 
    Dahl, F., Stenberg, J., Fredriksson, S., Welch, K., Zhang, M., Nilsson, M., Bicknell, D., Bodmer, W.F., Davis, R.W. and Ji, H. Proceedings of the National Academy of Sciences 104.22 (2007): 9387-9392. [PubMed]

  162. Branch migration displacement assay with automated heuristic analysis for discrete DNA length measurement using DNA microarrays. 
    Pourmand, N., Caramuta, S., Villablanca, A., Mori, S., Karhanek, M., Wang, S.X. and Davis, R.W. Proceedings of the National Academy of Sciences 104.15 (2007): 6146-6151. [PubMed]

  163. Multiplexed protein detection by proximity ligation for cancer biomarker validation. 
    Fredriksson, S., Dixon, W., Ji, H., Koong, A.C., Mindrinos, M. and Davis, R.W. Nature methods 4.4 (2007): 327-329. [PubMed]

  164. Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector. 
    Fredriksson, S., Baner, J., Dahl, F., Chu, A., Ji, H., Welch, K. and Davis, R.W. Nucleic acids research 35.7 (2007): e47. [PubMed]

  165. Accelerating the discovery of biologically active small molecules using a high-throughput yeast halo assay. 
    Gassner, N.C., Tamble, C.M., Bock, J.E., Cotton, N., White, K.N., Tenney, K., St. Onge, R.P., Proctor, M.J., Giaever, G., Nislow, C. and Davis, R.W. Journal of natural products 70.3 (2007): 383-390. [PubMed]

  166. High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing. 
    Juneau, K., Palm, C., Miranda, M. and Davis, R.W. Proceedings of the National Academy of Sciences 104.5 (2007): 1522-1527. [PubMed]

  167. Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions. 
    Onge, R.P.S., Mani, R., Oh, J., Proctor, M., Fung, E., Davis, R.W., Nislow, C., Roth, F.P. and Giaever, G. Nature genetics 39.2 (2007): 199-206. [PubMed]

  168. Rapid and Highly Informative Diagnostic Assay for H5N1 Influenza Viruses. 
    Pourmand, N., Diamond, L., Garten, R., Erickson, J.P., Kumm, J., Donis, R.O. and Davis, R.W. PLoS One 1.1 (2006): e95. [PubMed]

  169. Reproducibility Probability Score--incorporating measurement variability across laboratories for gene selection. 
    Lin, G., He, X., Ji, H., Shi, L., Davis, R.W. and Zhong, S. Nature biotechnology 24.12 (2006): 1476-1477. [PubMed]

  170. PathogenMIPer: a tool for the design of molecular inversion probes to detect multiple pathogens. 
    Thiyagarajan, S., Karhanek, M., Akhras, M., Davis, R.W. and Pourmand, N. “PathogenMIPer: a tool for the design of molecular inversion probes to detect multiple pathogens.” BMC bioinformatics 7 (2006): 1-10. [PubMed]

  171. Current rectification with poly-l-lysine-coated quartz nanopipettes. 
    Umehara, S., Pourmand, N., Webb, C.D., Davis, R.W., Yasuda, K. and Karhanek, M. Nano letters 6.11 (2006): 2486-2492. [PubMed]

  172. Cell-specific expression and pathway analyses reveal alterations in trauma-related human T cell and monocyte pathways. 
    Laudanski, K., Miller-Graziano, C., Xiao, W., Mindrinos, M.N., Richards, D.R., De, A., Moldawer, L.L., Maier, R.V., Bankey, P., Baker, H.V. and Brownstein, B.H. Proceedings of the National Academy of Sciences 103.42 (2006): 15564-15569. [PubMed]

  173. A high-resolution map of transcription in the yeast genome. 
    David, L., Huber, W., Granovskaia, M., Toedling, J., Palm, C.J., Bofkin, L., Jones, T., Davis, R.W. and Steinmetz, L.M. Proceedings of the National Academy of Sciences 103.14 (2005): 5320-5325. [PubMed]

  174. Functional genomics of genes with small open reading frames (sORFs) in S. cerevisiae. 
    Kastenmayer, J.P., Ni, L., Chu, A., Kitchen, L.E., Au, W.C., Yang, H., Carter, C.D., Wheeler, D., Davis, R.W., Boeke, J.D. and Snyder, M.A. Genome research 16.3 (2006): 365-373. [PubMed]

  175. A haplotype framework for cystic fibrosis mutations in Iran. 
    Elahi, E., Khodadad, A., Kupershmidt, I., Ghasemi, F., Alinasab, B., Naghizadeh, R., Eason, R.G., Amini, M., Esmaili, M., Dooki, M.R.E. and Sanati, M.H. The Journal of molecular diagnostics 8.1 (2006): 119-127. [PubMed]

  176. Data quality in genomics and microarrays. 
    Ji, H. and Davis, R.W. Nature biotechnology 24.9 (2006): 1112-1113. [PubMed]

  177. Molecular inversion probe analysis of gene copy alterations reveals distinct categories of colorectal carcinoma. 
    Ji, H., Kumm, J., Zhang, M., Farnam, K., Salari, K., Faham, M., Ford, J.M. and Davis, R.W. Cancer research 66.16 (2006): 7910-7919. [PubMed]

  178. Introns regulate RNA and protein abundance in yeast. 
    Juneau, K., Miranda, M., Hillenmeyer, M.E., Nislow, C. and Davis, R.W. Genetics 174.1  (2006): 511-518. [PubMed]

  179. High dynamic range characterization of the trauma patient plasma proteome. 
    Liu, T., Qian, W.J., Gritsenko, M.A., Xiao, W., Moldawer, L.L., Kaushal, A., Monroe, M.E., Varnum, S.M., Moore, R.J., Purvine, S.O. and Maier, R.V. Molecular & Cellular Proteomics 5.10 (2006): 1899-1913. [PubMed]

  180. A unique and universal molecular barcode array. 
    Pierce, S.E., Fung, E.L., Jaramillo, D.F., Chu, A.M., Davis, R.W., Nislow, C. and Giaever, G. Nature methods 3.8 (2006): 601-603. [PubMed]

  181. Direct electrical detection of DNA synthesis. 
    Pourmand, N., Karhanek, M., Persson, H.H., Webb, C.D., Lee, T.H., Zahradníková, A. and Davis, R.W. Proceedings of the National Academy of Sciences 103.17 (2006): 6466-6470. [PubMed]

  182. Prediction of protein orientation upon immobilization on biological and nonbiological surfaces. 
    Talasaz, A.H., Nemat-Gorgani, M., Liu, Y., Ståhl, P., Dutton, R.W., Ronaghi, M. and Davis, R.W. Proceedings of the National Academy of Sciences 103.40 (2006): 14773-14778. [PubMed]

  183. Analysis of hybridization on the molecular barcode GeneChip microarray. 
    Walton, S.P., Mindrinos, M.N. and Davis, R.W. Biochemical and biophysical research communications 348.2 (2006): 689-696. [PubMed]

  184. Transcriptional profiling of aging in human muscle reveals a common aging signature. 
    Zahn, J.M., Sonu, R., Vogel, H., Crane, E., Mazan-Mamczarz, K., Rabkin, R., Davis, R.W., Becker, K.G., Owen, A.B. & Kim, S.K. PLoS Genet 2 e115 (2006). [PubMed]

  185. Profiling early infection responses: Pseudomonas aeruginosa eludes host defenses by suppressing antimicrobial peptide gene expression. 
    Apidianakis, Y., Mindrinos, M.N., Xiao, W., Lau, G.W., Baldini, R.L., Davis, R.W. and Rahme, L.G. Proceedings of the National Academy of Sciences 102.7 (2005): 2573-2578. [PubMed]

  186. A network-based analysis of systemic inflammation in humans. 
    Calvano, S.E., Xiao, W., Richards, D.R., Felciano, R.M., Baker, H.V., Cho, R.J., Chen, R.O., Brownstein, B.H., Cobb, J.P., Tschoeke, S.K. and Miller-Graziano, C. Nature 437.7061 (2005): 1032-1037. [PubMed]

  187. Application of genome-wide expression analysis to human health and disease. 
    Cobb, J.P., Mindrinos, M.N., Miller-Graziano, C., Calvano, S.E., Baker, H.V., Xiao, W., Laudanski, K., Brownstein, B.H., Elson, C.M., Hayden, D.L. and Herndon, D.N.  Proceedings of the National Academy of Sciences 102.13 (2005): 4801-4806. [PubMed]

  188. Quantitative trait loci mapped to single-nucleotide resolution in yeast. 
    Deutschbauer, A.M. and Davis, R.W. Nature genetics 37.12 (2005): 1333-1340. [PubMed]

  189. Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast. 
    Deutschbauer, A.M., Jaramillo, D.F., Proctor, M., Kumm, J., Hillenmeyer, M.E., Davis, R.W., Nislow, C. and Giaever, G. Genetics 169.4 (2005): 1915-1925. [PubMed]

  190. Multiplexed variation scanning for 1,000 amplicons in hundreds of patients using mismatch repair detection (MRD) on tag arrays. 
    Faham, M., Zheng, J., Moorhead, M., Fakhrai-Rad, H., Namsaraev, E., Wong, K., Wang, Z., Chow, S.G., Lee, L., Suyenaga, K. and Reichert, J. Proceedings of the National Academy of Sciences 102.41 (2005): 14717-14722. [PubMed]

  191. A latent variable model for chemogenomic profiling. 
    Flaherty, P., Giaever, G., Kumm, J., Jordan, M.I. & Arkin, A.P. Bioinformatics 21 (2005): 3286-93.

  192. Elevated evolutionary rates in the laboratory strain of Saccharomyces cerevisiae. 
    Gu, Z., David, L., Petrov, D., Jones, T., Davis, R.W. and Steinmetz, L.M. Proceedings of the National Academy of Sciences 102.4 (2005): 1092-1097. [PubMed]

  193. Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay. 
    Hardenbol, P., Yu, F., Belmont, J., MacKenzie, J., Bruckner, C., Brundage, T., Boudreau, A., Chow, S., Eberle, J., Erbilgin, A. and Falkowski, M. Genome research 15.2 (2005): 269-275. [PubMed]

  194. Bioluminescence regenerative cycle (BRC) system: theoretical considerations for nucleic acid quantification assays. 
    Hassibi, A., Contag, C., Vlad, M.O., Hafezi, M., Lee, T.H., Davis, R.W. and Pourmand, N. Biophysical chemistry 116.3 (2005): 175-185. [PubMed]

  195. Microbes on the human vaginal epithelium. 
    Hyman, R.W., Fukushima, M., Diamond, L., Kumm, J., Giudice, L.C. and Davis, R.W. Proceedings of the National Academy of Sciences 102.22 (2005): 7952-7957. [PubMed]

  196. Single DNA molecule detection using nanopipettes and nanoparticles. 
    Karhanek, M., Kemp, J.T., Pourmand, N., Davis, R.W. and Webb, C.D. Nano letters 5.2 (2005): 403-407. [PubMed]

  197. A novel method for STR-based DNA profiling using microarrays. 
    Kemp, J.T., Davis, R.W., White, R.L., Wang, S.X. and Webb, C.D. Journal of forensic sciences 50.5 (2005): JFS2004429-5. [PubMed]

  198. Genome-Wide Requirements for Resistance to Functionally Distinct DNA-Damaging Agents. 
    Lee, W., St. Onge, R.P., Proctor, M., Flaherty, P., Jordan, M.I., Arkin, A.P., Davis, R.W., Nislow, C. and Giaever, G. PLoS genetics 1.2 (2005): e24. [PubMed]

  199. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. 
    Loftus, B.J., Fung, E., Roncaglia, P., Rowley, D., Amedeo, P., Bruno, D., Vamathevan, J., Miranda, M., Anderson, I.J., Fraser, J.A. and Allen, J.E. Science 307.5713 (2005): 1321-1324. [PubMed]

  200. Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry. 
    Qian, W.J., Jacobs, J.M., Camp, D.G., Monroe, M.E., Moore, R.J., Gritsenko, M.A., Calvano, S.E., Lowry, S.F., Xiao, W., Moldawer, L.L. and Davis, R.W. Proteomics 5.2 (2005): 572-584. [PubMed]

  201. Quantitative Proteome Analysis of Human Plasma following in Vivo Lipopolysaccharide Administration Using 16O/18O Labeling and the Accurate Mass and Time Tag Approach. 
    Qian, W.J., Monroe, M.E., Liu, T., Jacobs, J.M., Anderson, G.A., Shen, Y., Moore, R.J., Anderson, D.J., Zhang, R., Calvano, S.E. and Lowry, S.F. Molecular & Cellular Proteomics 4.5 (2005): 700-709. [PubMed]

  202. A multi-enzyme model for Pyrosequencing. 
    Agah, A., Aghajan, M., Mashayekhi, F., Amini, S., Davis, R.W., Plummer, J.D., Ronaghi, M. and Griffin, P.B. Nucleic acids research 32.21 (2004): e166-e166. [PubMed]

  203. Characterization of synthetic DNA bar codes in Saccharomyces cerevisiae gene-deletion strains. 
    Eason, R.G., Pourmand, N., Tongprasit, W., Herman, Z.S., Anthony, K., Jejelowo, O., Davis, R.W. and Stolc, V. Proceedings of the National Academy of Sciences 101.30 (2004): 11046-11051. [PubMed]

  204. SNP discovery in pooled samples with mismatch repair detection. 
    Fakhrai-Rad, H., Zheng, J., Willis, T.D., Wong, K., Suyenaga, K., Moorhead, M., Eberle, J., Thorstenson, Y.R., Jones, T., Davis, R.W. and Namsaraev, E. Genome research 14.7 (2004): 1404-1412. [PubMed]

  205. Inflammation and Host Response to Injury, Large-Scale Collaborative Research Program. Whole blood and leukocyte RNA isolation for gene expression analyses. 
    Feezor RJ, Baker HV, Mindrinos M, Hayden D, Tannahill CL, Brownstein BH, Fay A, MacMillan S, Laramie J, Xiao W, Moldawer LL, Cobb JP, Laudanski K, Miller-Graziano CL, Maier RV, Schoenfeld D, Davis RW, Tompkins RG. Physiol Genomics. 19.3 (2004):247-54. [PubMed]

  206. Genomic and proteomic determinants of outcome in patients undergoing thoracoabdominal aortic aneurysm repair. 
    Feezor, R.J., Baker, H.V., Xiao, W., Lee, W.A., Huber, T.S., Mindrinos, M., Kim, R.A., Ruiz-Taylor, L., Moldawer, L.L., Davis, R.W. and Seeger, J.M. The Journal of Immunology 172.11 (2004): 7103-7109. [PubMed]

  207. Chemogenomic profiling: identifying the functional interactions of small molecules in yeast. 
    Giaever, G., Flaherty, P., Kumm, J., Proctor, M., Nislow, C., Jaramillo, D.F., Chu, A.M., Jordan, M.I., Arkin, A.P. and Davis, R.W. Proceedings of the National Academy of Sciences 101.3 (2004): 793-798. [PubMed]

  208. The diploid genome sequence of Candida albicans. 
    Jones, T., Federspiel, N.A., Chibana, H., Dungan, J., Kalman, S., Magee, B.B., Newport, G., Thorstenson, Y.R., Agabian, N., Magee, P.T. and Davis, R.W. Proceedings of the National Academy of Sciences 101.19 (2004): 7329-7334. [PubMed]

  209. Regulatory networks affected by iron availability in Candida albicans. 
    Lan, C.Y., Rodarte, G., Murillo, L.A., Jones, T., Davis, R.W., Dungan, J., Newport, G. and Agabian, N. Molecular microbiology 53.5 (2004): 1451-1469.  [PubMed]

  210. Sister-chromatid cohesion mediated by the alternative RF-CCtf18/Dcc1/Ctf8, the helicase Chl1 and the polymerase-alpha-associated protein Ctf4 is essential for chromatid disjunction during meiosis II. 
    Petronczki, M., Chwalla, B., Siomos, M.F., Yokobayashi, S., Helmhart, W., Deutschbauer, A.M., Davis, R.W., Watanabe, Y. and Nasmyth, K. Journal of cell science 117.16 (2004): 3547-3559. [PubMed]

  211. Integrative analysis of the mitochondrial proteome in yeast. 
    Prokisch, H., Scharfe, C., Camp, D.G., Xiao, W., David, L., Andreoli, C., Monroe, M.E., Moore, R.J., Gritsenko, M.A., Kozany, C. and Hixson, K.K. PLoS Biology 2.6 (2004): e160. [PubMed]

  212. A transcriptional profile of aging in the human kidney. 
    Rodwell, G.E.J., Sonu, R., Zahn, J.M., Lund, J., Wilhelmy, J., Wang, L., Xiao, W., Mindrinos, M., Crane, E., Segal, E. and Myers, B.D. PLoS biology 2.12 (2004): e427. [PubMed]

  213. Ultra-high-efficiency strong cation exchange LC/RPLC/MS/MS for high dynamic range characterization of the human plasma proteome. 
    Shen, Y., Jacobs, J.M., Camp, D.G., Fang, R., Moore, R.J., Smith, R.D., Xiao, W., Davis, R.W. and Tompkins, R.G.  Analytical chemistry 76.4 (2004): 1134-1144. [PubMed]

  214. Maximizing the potential of functional genomics. 
    Steinmetz, L.M. and Davis, R.W. Nature Reviews Genetics 5.3 (2004): 190-201. [PubMed]

  215. To give or not to give? That is the question. 
    Theologis, A. and Davis, R.W. Plant Physiology 135.1 (2004): 4-9. [PubMed Central]

  216. A genome-wide study of gene activity reveals developmental signaling pathways in the preimplantation mouse embryo. 
    Wang, Q.T., Piotrowska, K., Ciemerych, M.A., Milenkovic, L., Scott, M.P., Davis, R.W. and Zernicka-Goetz, M. Developmental cell 6.1 (2004): 133-144. [PubMed]

  217. GermOnline, a cross-species community knowledgebase on germ cell differentiation. 
    Wiederkehr C, Basavaraj R, Sarrauste de Menthiere C, Hermida L, Koch R, Schlecht U, Amon A, Brachat S, Breitenbach M, Briza P, Caburet S, Cherry M, Davis R, Deutschbauer A, Dickinson HG, Dumitrescu T, Fellous M, Goldman A, Grootegoed JA, Hawley R, Ishii R, Jegou B, Kaufman RJ, Klein F, Lamb N, Maro B, Nasmyth K, Nicolas A, Orr-Weaver T, Philippsen P, Pineau C, Rabitsch KP, Reinke V, Roest H, Saunders W, Schroder M, Schedl T, Siep M, Villeneuve A, Wolgemuth DJ, Yamamoto M, Zickler D, Esposito RE, Primig M. Nucleic Acids Res (2004). [PubMed]

  218. Role of duplicated genes in genetic robustness against null mutations. 
    Gu, Z., Steinmetz, L.M., Gu, X., Scharfe, C., Davis, R.W. and Li, W.H. Nature 421.6918 (2003): 63-66. [PubMed]

  219. Multiplexed genotyping with sequence-tagged molecular inversion probes. 
    Hardenbol, P., Banér, J., Jain, M., Nilsson, M., Namsaraev, E.A., Karlin-Neumann, G.A., Fakhrai-Rad, H., Ronaghi, M., Willis, T.D., Landegren, U. and Davis, R.W. Nature biotechnology 21.6 (2003): 673-678. [PubMed]

  220. Empirical analysis of transcriptional activity in the Arabidopsis genome. 
    Yamada, K., Lim, J., Dale, J.M., Chen, H., Shinn, P., Palm, C.J., Southwick, A.M., Wu, H.C., Kim, C., Nguyen, M., Pham, P., Cheuk, R., Karlin-Newmann, G., Liu, S.X., Lam, B., Sakano, H., Wu, T., Yu, G., Miranda, M., Quach, H.L., Tripp, M., Chang, C.H., Lee, J.M., Toriumi, M., Chan, M.M., Tang, C.C., Onodera, C.S., Deng, J.M., Akiyama, K., Ansari, Y., Arakawa, T., Banh, J., Banno, F., Bowser, L., Brooks, S., Carninci, P., Chao, Q., Choy, N., Enju, A., Goldsmith, A.D., Gurjal, M., Hansen, N.F., Hayashizaki, Y., Johnson-Hopson, C., Hsuan, V.W., Iida, K., Karnes, M., Khan, S., Koesema, E., Ishida, J., Jiang, P.X., Jones, T., Kawai, J., Kamiya, A., Meyers, C., Nakajima, M., Narusaka, M., Seki, M., Sakurai, T., Satou, M., Tamse, R., Vaysberg, M., Wallender, E.K., Wong, C., Yamamura, Y., Yuan, S., Shinozaki, K., Davis, R.W., Theologis, A. & Ecker, J.R. Science 302 (2003): 842-6. [Pubmed]

  221. Genotyping African haplotypes in ATM using a co-spotted single-base extension assay. 
    Jain, M., Thorstenson, Y.R., Faulkner, D.M., Pourmand, N., Jones, T., Au, M., Oefner, P.J., White, K.P. and Davis, R.W. Human mutation 22.3 (2003): 214-221. [PubMed]

  222. Region-specific changes in immediate early gene expression in response to sleep deprivation and recovery sleep in the mouse brain. 
    Terao, A., Greco, M.A., Davis, R.W., Heller, H.C. and Kilduff, T.S. Neuroscience 120.4 (2003): 1115-1124. [PubMed]

  223. Differential increase in the expression of heat shock protein family members during sleep deprivation and during sleep. 
    Terao, A., Steininger, T.L., Hyder, K., Apte-Deshpande, A., Ding, J., Rishipathak, D., Davis, R.W., Heller, H.C. and Kilduff, T.S. Neuroscience 116.1 (2003): 187-200. [PubMed]

  224. Contributions of ATM mutations to familial breast and ovarian cancer. 
    Thorstenson, Y.R., Roxas, A., Kroiss, R., Jenkins, M.A., Yu, K.M., Bachrich, T., Muhr, D., Wayne, T.L., Chu, G., Davis, R.W. and Wagner, T.M. Cancer research 63.21 (2003): 3325-3333. [PubMed]

  225. Determination of hepatitis C virus genotype by Pyrosequencing. 
    Elahi, E., Pourmand, N., Chaung, R., Rofoogaran, A., Boisver, J., Samimi-Rad, K., Davis, R.W. and Ronaghi, M. Journal of virological methods 109.2 (2003): 171-176. [PubMed]

  226. The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast. 
    Williams, R.M., Primig, M., Washburn, B.K., Winzeler, E.A., Bellis, M., Sarrauste de Menthière, C., Davis, R.W. and Esposito, R.E. Proceedings of the National Academy of Sciences 99.21 (2002): 13431-13436. [PubMed]

  227. Sequence of Plasmodium falciparum chromosome 12. 
    Hyman, R.W., Fung, E., Conway, A., Kurdi, O., Mao, J., Miranda, M., Nakao, B., Rowley, D., Tamaki, T., Wang, F. and Davis, R.W. Nature 419.6906 (2002): 534-537. [PubMed]

  228. Genome sequence of the human malaria parasite Plasmodium falciparum. 
    Gardner, M.J., Hall, N., Fung, E., White, O., Berriman, M., Hyman, R.W., Carlton, J.M., Pain, A., Nelson, K.E., Bowman, S., Paulsen, I.T., James, K., Eisen, J.A., Rutherford, K., Salzberg, S.L., Craig, A., Kyes, S., Chan, M.S., Nene, V., Shallom, S.J., Suh, B., Peterson, J., Angiuoli, S., Pertea, M., Allen, J., Selengut, J., Haft, D., Mather, M.W., Vaidya, A.B., Martin, D.M., Fairlamb, A.H., Fraunholz, M.J., Roos, D.S., Ralph, S.A., McFadden, G.I., Cummings, L.M., Subramanian, G.M., Mungall, C., Venter, J.C., Carucci, D.J., Hoffman, S.L., Newbold, C., Davis, R.W., Fraser, C.M. & Barrell, B. Nature 419 (2002): 498-511. [PubMed]

  229. Gene expression during the life cycle of Drosophila melanogaster. 
    Arbeitman, M.N., Furlong, E.E., Imam, F., Johnson, E., Null, B.H., Baker, B.S., Krasnow, M.A., Scott, M.P., Davis, R.W. and White, K.P. Science 297.5590 (2002): 2270-2275. [PubMed]

  230. Functional profiling of the Saccharomyces cerevisiae genome. 
    Giaever, G., Chu, A.M., Ni, L., Connelly, C., Riles, L., Véronneau, S., Dow, S., Lucau-Danila, A., Anderson, K., André, B. and Arkin, A.P. Nature 418.6896 (2002): 387-391. [PubMed]

  231. Systematic screen for human disease genes in yeast. 
    Steinmetz, L.M., Scharfe, C., Deutschbauer, A.M., Mokranjac, D., Herman, Z.S., Jones, T., Chu, A.M., Giaever, G., Prokisch, H., Oefner, P.J. and Davis, R.W. Nature genetics 31.4 (2002): 400-404. [PubMed]

  232. Transcriptional response of Saccharomyces cerevisiae to DNA-damaging agents does not identify the genes that protect against these agents. 
    Birrell, G.W., Brown, J.A., Wu, H.I., Giaever, G., Chu, A.M., Davis, R.W. and Brown, J.M. Proceedings of the National Academy of Sciences 99.13 (2002): 8778-8783. [PubMed]

  233. Multiplex Pyrosequencing. 
    Pourmand, N., Elahi, E., Davis, R.W. and Ronaghi, M. Nucleic acids research 30.7 (2002): e31-e31. [PubMed]

  234. Dissecting the architecture of a quantitative trait locus in yeast. 
    Steinmetz, L.M., Sinha, H., Richards, D.R., Spiegelman, J.I., Oefner, P.J., McCusker, J.H. and Davis, R.W. Nature 416.6878 (2002): 326-330. [PubMed]

  235. Identification and preliminary characterization of mouse Adam33. 
    Gunn, T.M., Azarani, A., Kim, P.H., Hyman, R.W., Davis, R.W. and Barsh, G.S. BMC genetics 3 (2002): 1-8. [PubMed]

  236. Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae. 
    Deutschbauer, A.M., Williams, R.M., Chu, A.M. and Davis, R.W. Proceedings of the National Academy of Sciences 99.24 (2002): 15530-15535. [PubMed]

  237. Metabolic specialization associated with phenotypic switching in Candida albicans. 
    Lan, C.Y., Newport, G., Murillo, L.A., Jones, T., Scherer, S., Davis, R.W. and Agabian, N. Proceedings of the National Academy of Sciences 99.23 (2002): 14907-14912. [PubMed]

  238. Yeast tRNA as carrier in the isolation of microscale RNA for global amplification and expression profiling. 
    Wang, Q.T., Xiao, W., Mindrinos, M. and Davis, R.W. Biotechniques 33.4 (2002): 788-796. [PubMed]

  239. A genome-wide screen in Saccharomyces cerevisiae for genes affecting UV radiation sensitivity. 
    Birrell, G.W., Giaever, G., Chu, A.M., Davis, R.W. and Brown, J.M. Proceedings of the National Academy of Sciences 98.22 (2001): 12608-12613. [PubMed]

  240. Replication dynamics of the yeast genome. 
    Raghuraman, M.K., Winzeler, E.A., Collingwood, D., Hunt, S., Wodicka, L., Conway, A., Lockhart, D.J., Davis, R.W., Brewer, B.J. and Fangman, W.L. Science 294.5540 (2001): 115-121. [PubMed]

  241. Nucleotide sequence and predicted functions of the entire Sinorhizobium meliloti pSymA megaplasmid. 
    Barnett, M.J., Fisher, R.F., Jones, T., Komp, C., Abola, A.P., Barloy-Hubler, F., Bowser, L., Capela, D., Galibert, F., Gouzy, J. and Gurjal, M. Proceedings of the National Academy of Sciences 98.17 (2001): 9883-9888. [PubMed]

  242. The composite genome of the legume symbiont Sinorhizobium meliloti. 
    Galibert, F., Finan, T.M., Long, S.R., Pühler, A., Abola, P., Ampe, F., Barloy-Hubler, F., Barnett, M.J., Becker, A., Boistard, P. and Bothe, G. Science 293.5530 (2001): 668-672. [PubMed]

  243. Expression monitoring using cDNA microarrays. A general protocol. 
    Lou, X.J., Schena, M., Horrigan, F.T., Lawn, R.M. and Davis, R.W. Genomics Protocols (2001): 323-340. [PubMed]

  244. Genomic evidence for a complete sexual cycle in Candida albicans. 
    Tzung, K.W., Williams, R.M., Scherer, S., Federspiel, N., Jones, T., Hansen, N., Bivolarevic, V., Huizar, L., Komp, C., Surzycki, R. and Tamse, R. Proceedings of the National Academy of Sciences 98.6 (2001): 3249-3253. [PubMed]

  245. Initial sequencing and analysis of the human genome. 
    Lander, E.S., Linton, L.M., Birren, B., Nusbaum, C., Zody, M.C., Baldwin, J., Devon, K., Dewar, K., Doyle, M., et al. Nature 409 (2001): 860-921. [PubMed]

  246. A method for parallel, automated, thermal cycling of submicroliter samples. 
    Nakane, J., Broemeling, D., Donaldson, R., Marziali, A., Willis, T.D., O'Keefe, M. and Davis, R.W. Genome research 11.3 (2001): 441-447. [PubMed]

  247. Transcriptional regulation and function during the human cell cycle. 
    Cho, R.J., Huang, M., Campbell, M.J., Dong, H., Steinmetz, L., Sapinoso, L., Hampton, G., Elledge, S.J., Davis, R.W. and Lockhart, D.J. Nature genetics 27.1 (2001): 48-54. [PubMed]

  248. Mapping genes in Saccharomyces cerevisiae and arabidopsis thaliana using high-density DNA arrays and denaturing high-performance liquid chromatography. 
    Steinmetz, L., Mindrinos, M., Spiegelman, J., Richards, D., Xiao, W., Fankhauser, C., McCusker, J., Chory, J., Davis, R., Oefner, P. Hum. Mutat 17 (2001): 323.

  249. Global analysis of ATM polymorphism reveals significant functional constraint. 
    Thorstenson, Y.R., Shen, P., Tusher, V.G., Wayne, T.L., Davis, R.W., Chu, G. and Oefner, P.J. The American Journal of Human Genetics 69.2 (2001): 396-412. [PubMed]

  250. High-density arrays and insights into genome function. 
    Steinmetz, L.M. and Davis, R.W. Biotechnology and Genetic Engineering Reviews 17.1 (2000): 109-146.

  251. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. 
    Theologis, A., Ecker, J.R., Palm, C.J., Federspiel, N.A., Kaul, S., White, O., Alonso, J., Altafi, H., Araujo, R., Bowman, C.L. and Brooks, S.Y. Nature 408.6814 (2000): 816-820. [PubMed]

  252. A simple procedure for the analysis of single nucleotide polymorphisms facilitates map-based cloning in Arabidopsis. 
    Drenkard, E., Richter, B.G., Rozen, S., Stutius, L.M., Angell, N.A., Mindrinos, M., Cho, R.J., Oefner, P.J., Davis, R.W. and Ausubel, F.M. Plant physiology 124.4 (2000): 1483-1492. [PubMed]

  253. The core meiotic transcriptome in budding yeasts. 
    Primig, M., Williams, R.M., Winzeler, E.A., Tevzadze, G.G., Conway, A.R., Hwang, S.Y., Davis, R.W. and Esposito, R.E. Nature genetics 26.4 (2000): 415-423. [PubMed]

  254. Prevalence of small inversions in yeast gene order evolution. 
    Seoighe, C., Federspiel, N., Jones, T., Hansen, N., Bivolarovic, V., Surzycki, R., Tamse, R., Komp, C., Huizar, L., Davis, R.W. and Scherer, S. Proceedings of the National Academy of Sciences 97.26 (2000): 14433-14437. [PubMed]

  255. Functional analysis of the yeast genome by precise deletion and parallel phenotypic characterization. 
    Winzeler, E.A., Liang, H., Shoemaker, D.D. and Davis, R.W. In Novartis Foundation Symposium Chichester, New York, John Wiley (2000): 105-111. [PubMed]

  256. Y chromosome sequence variation and the history of human populations. 
    Underhill, P.A., Shen, P., Lin, A.A., Jin, L., Passarino, G., Yang, W.H., Kauffman, E., Bonné-Tamir, B., Bertranpetit, J., Francalacci, P. and Ibrahim, M. Nature genetics 26.3 (2000): 358-361. [PubMed]

  257. Real-time PCR-based method for assaying the purity of bacterial artificial chromosome preparations. 
    Foreman, P.K. and Davis, R.W. Biotechniques 29.3 (2000): 410-412. [PubMed]

  258. Population genetic implications from sequence variation in four Y chromosome genes. 
    Shen, P., Wang, F., Underhill, P.A., Franco, C., Yang, W.H., Roxas, A., Sung, R., Lin, A.A., Hyman, R.W., Vollrath, D. and Davis, R.W. Proceedings of the National Academy of Sciences 97.13 (2000): 7354-7359. [PubMed]

  259. Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. 
    Aharoni, A., Keizer, L.C., Bouwmeester, H.J., Sun, Z., Alvarez-Huerta, M., Verhoeven, H.A., Blaas, J., Van Houwelingen, A.M., De Vos, R.C., Van Der Voet, H. and Jansen, R.C. The Plant Cell 12.5 (2000): 647-661. [PubMed]

  260. DAtA: database of Arabidopsis thaliana annotation. 
    Palm, C.J., Federspiel, N.A. and Davis, R.W. Nucleic acids research 28.1 (2000): 102-103. [PubMed]

  261. Comprehensive mutational analysis of the ATM gene by denaturing HPLC. 
    Thorstenson, Y.R., Oefner, P.J., Goss, V., Davis, R.W., Gatti, R.A., Chu, G. Am. J. Hum. Genet 67.2 (2000):100.

  262. Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. 
    Ter Linde, J.J.M., Liang, H., Davis, R.W., Steensma, H.Y., Van Dijken, J.P. and Pronk, J. Journal of Bacteriology 181.24 (1999): 7409-7413. [PubMed]

  263. Genome-wide mapping with biallelic markers in Arabidopsis thaliana. 
    Cho, R.J., Mindrinos, M., Richards, D.R., Sapolsky, R.J., Anderson, M., Drenkard, E., Dewdney, J., Reuber, T.L., Stammers, M., Federspiel, N. and Theologis, A. Nature genetics 23.2 (1999): 203-207. [PubMed]

  264. Whole genome genetic-typing in yeast using high-density oligonucleotide arrays. 
    Winzeler, E.A., Lee, B., McCusker, J.H. and Davis, R.W. Parasitology 118.7 (1999): 73-80. [PubMed]

  265. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. 
    Winzeler, E.A., Shoemaker, D.D., Astromoff, A., Liang, H., Anderson, K., Andre, B., Bangham, R., Benito, R., Boeke, J.D., Bussey, H. and Chu, A.M., Davis, R.W. Science 285.5429 (1999): 901-906. [PubMed]

  266. Fluorescence-based expression monitoring using microarrays. 
    Winzeler, E.A., Schena, M. and Davis, R.W. Methods in Enzymology 306 (1999): 3-18. [PubMed]

  267. An automated sample preparation system for large-scale DNA sequencing. 
    Marziali, A., Willis, T.D., Federspiel, N.A. and Davis, R.W. Genome research 9.5 (1999): 457-462. [PubMed]

  268. Comparative genomes of Chlamydia pneumoniae and C. trachomatis. 
    Kalman, S., Mitchell, W., Marathe, R., Lammel, C., Fan, J., Hyman, R.W., Olinger, L., Grimwood, J., Davis, R.W. and Stephens, R. Nature genetics 21.4 (1999): 385-389. [PubMed]

  269. Distribution of haplotypes from a chromosome 21 region distinguishes multiple prehistoric human migrations. 
    Jin, L., Underhill, P.A., Doctor, V., Davis, R.W., Shen, P., Cavalli-Sforza, L.L. and Oefner, P.J. Proceedings of the National Academy of Sciences 96.7 (1999): 3796-3800. [PubMed]

  270. The mouse mahogany locus encodes a transmembrane form of human attractin. 
    Gunn, T.M., Miller, K.A., He, L., Hyman, R.W., Davis, R.W., Azarani, A., Schlossman, S.F., Duke-Cohan, J.S. and Barsh, G.S. Nature 398.6723 (1999): 152-156. [PubMed]

  271. Genomic profiling of drug sensitivities via induced haploinsufficiency. 
    Giaever, G., Shoemaker, D.D., Jones, T.W., Liang, H., Winzeler, E.A., Astromoff, A. and Davis, R.W. Nature genetics 21.3 (1999): 278-283. [PubMed]

  272. On the in vivo function of the RecA ATPase. 
    Campbell, M.J. & Davis, R.W. J Mol Biol 286, 437-45 (1999). [PubMed]

  273. Toxic mutations in the recA gene of E. coli prevent proper chromosome segregation. 
    Campbell, M.J. and Davis, R.W. Journal of molecular biology 286.2 (1999):  417-435. [PubMed]

  274. An arrayable flow-through microcentrifuge for high-throughput instrumentation. 
    Marziali, A., Willis, T.D. and Davis, R.W. Proceedings of the National Academy of Sciences 96.1 (1999): 61-66. [PubMed]

  275. Plasmodium falciparum 3D7 chromosome 12 YAC B8-95 genomic sequence. GenBank: accession number AC006281. 
    Hyman, R.W., Fung, E., Qin, F., Tomaki, T., Kurdi, O. and Davis, R.W. GenBank (1999).

  276. Plasmodium falciparium 3D7 chromosome 12 YAC 614 genomic sequence. GenBank: accession number AC006279. 
    Hyman, R.W., Fung, E., Qin, F., Tomaki, T., Kurdi, O., Davis, R.W. GenBank (1999).

  277. Plasmodium falciparum 3D7 chromosome 12 YAC 724 genomic sequence. GenBank: accession number AC006280. 
    Hyman, R.W., Fung, E., Qin, F., Tomaki, T., Kurdi, O., Davis, R.W. GenBank (1999).

  278. Genes, Genomes and Chips, in DNA Microarrays: A Practical Approach. 
    Schena, M.A.R.K. and Davis, R.W. DNA Microarrays: A Practical Approach (1999): 1-15.

  279. Parallel analysis with Biological Chips. 
    Schena, M. and Davis, R.W. In PCR Applications Academic Press (1999): 445-456.

  280. Y-Chromosome evidence for a northward migration of modern humans into Eastern Asia during the last Ice Age. 
    Su, B., Xiao, J., Underhill, P., Deka, R., Zhang, W., Akey, J., Huang, W., Shen, D., Lu, D., Luo, J. and Chu, J. The American Journal of Human Genetics 65.6 (1999): 1718-1724. [PubMed]

  281. A low rate of nucleotide changes in Escherichia coli K-12 estimated from a comparison of the genome sequences between two different substrains. 
    Itoh T, Okayama T, Hashimoto H, Takeda J, Davis RW, Mori H, Gojobori T. FEBS Lett. 450.1-2 (1999): 72-6. [PubMed]

  282. Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. 
    Stephens, R.S., Kalman, S., Lammel, C., Fan, J., Marathe, R., Aravind, L., Mitchell, W., Olinger, L., Tatusov, R.L., Zhao, Q. and Koonin, E.V. Science 282.5389 (1988): 754-759. [PubMed]

  283. An automated hydrodynamic process for controlled, unbiased DNA shearing. 
    Thorstenson, Y.R., Hunicke-Smith, S.P., Oefner, P.J. and Davis, R.W. Genome Research 8.8 (1988): 848-855. [PubMed]

  284. Direct allelic variation scanning of the yeast genome. 
    Winzeler, E.A., Richards, D.R., Conway, A.R., Goldstein, A.L., Kalman, S., McCullough, M.J., McCusker, J.H., Stevens, D.A., Wodicka, L., Lockhart, D.J. and Davis, R.W. Science 281.5380 (1988): 1194-1197. [PubMed]

  285. A genome-wide transcriptional analysis of the mitotic cell cycle. 
    Cho, R.J., Campbell, M.J., Winzeler, E.A., Steinmetz, L., Conway, A., Wodicka, L., Wolfsberg, T.G., Gabrielian, A.E., Landsman, D., Lockhart, D.J. and Davis, R.W. Molecular cell 2.1 (1988): 65-73. [PubMed]

  286. Microarrays: biotechnology's discovery platform for functional genomics. 
    Schena, M., Heller, R.A., Theriault, T.P., Konrad, K., Lachenmeier, E. and Davis, R.W. Trends in biotechnology 16.7 (1988): 301-306. [PubMed]

  287. Mapping cloned sequences on YACs. 
    Schena, M., Heller, R.A., Theriault, T.P., Konrad, K., Lachenmeier, E. and Davis, R.W. Trends in biotechnology 16.7 (1988): 301-306.

  288. Parallel analysis of genetic selections using whole genome oligonucleotide arrays. 
    Cho, R.J., Fromont-Racine, M., Wodicka, L., Feierbach, B., Stearns, T., Legrain, P., Lockhart, D.J. and Davis, R.W. Proceedings of the National Academy of Sciences 95.7 (1988): 3752-3757. [PubMed]

  289. Plasmodium falciparum 3D7 chromosome 12 PFYAC812 genomic sequence. GenBank: accession number AC004153. 
    Hyman, R.W., Qin, F., Fung, E.L., Conway, A.B., Davis, R.W. (1998).

  290. Plasmodium falciparum 3D7 chromosome 12 PFYAC293 genomic sequence. GenBank: accession number AC004157. 
    Hyman, R.W., Qin, F., Fung, E.L., Conway, A.B., Davis, R.W. (1998).

  291. Plasmodium falciparum 3D7 chromosome 12 YAC 69 genomic sequence. GenBank: accession number AC004688. 
    Hyman, R.W., Qin, F., Fung, E., Conway, A., Davis, R.W. (1998).

  292. Plasmodium falciparum 3D7 chromosome 12 YAC 588 genomic sequence. GenBank: accession number AC004710. 
    Hyman, R.W., Qin, F., Fung, E., Conway, A., Davis, R.W. (1998).

  293. Plasmodium falciparum 3D7 chromosome 12 YAC 1122 genomic sequence. GenBank: accession number AC004709. Hyman, R.W., Qin, F., Fung, E., Conway, A., Davis, R.W.(1998).

  294. Plasmodium falciparum 3D7 chromosome 12 YAC B8-420 genomic sequence. GenBank: accession number AC005140. 
    Hyman, R.W., Fung, E., Qin, F., Conway, A., Davis, Ronald W. (1998).

  295. Plasmodium falciparum 3D7 chromosome 12 YAC 336 genomic sequence. GenBank: accession number AC005139. 
    Hyman, R.W., Fung, E., Qin, F., Conway, A., Davis, R.W. (1998).

  296. Plasmodium falciparum 3D7 chromosome 12 YAC 492 genomic sequence. GenBank: accession number AC005308. 
    Hyman, R.W., Fung, E., Qin, F., Conway, A., Davis, R.W. (1998).

  297. Plasmodium falciparum 3D7 chromosome 12 YAC 1383 genomic sequence. GenBank: accession number AC005504. 
    Hyman, R.W., Fung, E., Qin, F., Conway, A.B., Davis, R.W. (1998).

  298. Plasmodium falciparum 3D7 chromosome 12 YAC 181 genomic sequence. GenBank: accession number AC005505. 
    Hyman, R.W., Qin, F., Fung, E.L., Conway, A.B., Davis, R.W. (1998).

  299. Plasmodium falciparum 3D7 chromosome 12 YAC 357 genomic sequence. GenBank: accession number AC005506. 
    Hyman, R.W., Qin, F., Fung, E.L., Conway, A.B., Davis, R.W. (1998).

  300. Plasmodium falciparum 3D7 chromosome 12 YAC B8-628 genomic sequence. GenBank: accession number AC005507. 
    Hyman, R.W., Qin, F., Fung, E.L., Conway, A.B., Davis, R.W. (1998).

  301. Panorama of Y chromosome SNP haplotype diversity in Pakistan. 
    Underhill, P.A., Mehdi, S.Q., Cavalli-Sforza, L.L., Davis, R.W., Oefner, P.J. Am. J. Hum. Genet 63 (1998): A223. [no abstract available]

  302. Functional analysis of the yeast genome. 
    Winzeler, E.A. and Davis, R.W. Current opinion in genetics & development 7.6 (1997): 771-776. [PubMed]

  303. Yeast microarrays for genome wide parallel genetic and gene expression analysis. 
    Lashkari, D.A., DeRisi, J.L., McCusker, J.H., Namath, A.F., Gentile, C., Hwang, S.Y., Brown, P.O. and Davis, R.W. Proceedings of the National Academy of Sciences 94.24 (1997): 13057-13062. [PubMed]

  304. Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography. 
    Underhill, P.A., Jin, L., Lin, A.A., Mehdi, S.Q., Jenkins, T., Vollrath, D., Davis, R.W., Cavalli-Sforza, L.L. and Oefner, P.J. Genome research 7.10 (1997): 996-1005. [PubMed]

  305. Whole genome analysis: experimental access to all genome sequenced segments through larger-scale efficient oligonucleotide synthesis and PCR.                                                                                                                                         Lashkari, D.A., McCusker, J.H. and Davis, R.W. Proceedings of the National Academy of Sciences 94.17 (1997): 8945-8947. [PubMed]

  306. Ca(2+)-activated anion channels and membrane depolarizations induced by blue light and cold in Arabidopsis seedlings. 
    Lewis, B.D., Karlin-Neumann, G., Davis, R.W. and Spalding, E.P. Plant Physiology 114.4 (1997): 1327-1334. [PubMed]

  307. Application of DNA typing methods and genetic analysis to epidemiology and taxonomy of Saccharomyces isolates. 
    Clemons, K.V., Park, P., McCusker, J.H., McCullough, M.J., Davis, R.W. and Stevens, D.A. Journal of clinical microbiology 35.7 (1997): 1822-1828. [PubMed]

  308. The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. 
    Bussey, H., Storms, R.K., Ahmed, A., Albermann, K., Allen, E., Ansorge, W., Araujo, R., Aparicio, A., Barrell, B., Badcock, K., Benes, V., Botstein D., Bowman, S., Brückner M., Carpenter, J., J.M. Nature Vol. 387.6632 (1997): 103-105. [PubMed]

  309. Discovery and analysis of inflammatory disease-related genes using cDNA microarrays. 
    Heller, R.A., Schena, M., Chai, A., Shalon, D., Bedilion, T., Gilmore, J., Woolley, D.E. and Davis, R.W. Proceedings of the National Academy of Sciences 94.6 (1997): 2150-2155. [PubMed]

  310. Mapping expressed sequence tag sites on yeast artificial chromosome clones of Arabidopsis thaliana DNA. 
    Agyare, F.D., Lashkari, D.A., Lagos, A., Namath, A.F., Lagos, G., Davis, R.W. and Lemieux, B. Genome research 7.1 (1997): 1-9. [PubMed]

  311. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. 
    Dietrich, F.S., Mulligan, J., Hennessy, K., Yelton, M.A., Allen, E., Araujo, R., Aviles, E., Berno, A., Brennan, T., Carpenter, J. and Chen, E. Nature 387 (Suppl 6632) (1997): 78-81. [PubMed]

  312. Automation for the Arabidopsis genome sequencing project. 
    Marziali, A., Federspiel, N. and Davis, R. Trends in plant science 2.2 (1997): 71-74.

  313. Escherichia coli chromosome minutes 9-11. Genbank: accession number U82664. 
    Roberts, D., Allen, E., Araujo, R., Aparicio, A., Chung, E., Davis, K., Duncan, M., Federspiel, N., Hyman, R. W., Kalman, S., Komp, C., Kurdi, O., Lew, H., Lin, D., Namath, A., Oefner, P., Schramm, S., Davis, R.W. (1997).

  314. Escherichia coli chromosome minutes 9-12. Genbank: accession number U82598. 
    Chung, E., Allen, E., Araujo,R., Aparicio, A., Davis, K., Duncan, M., Federspiel, N., Hyman, R.W., Kalman, S., Komp, C., Kurdi, O., Lew, H., Lin, D., Namath, A., Oefner, P., Schramm, S., Davis, R.W. (1997).

  315. The nucleotide sequence of chromosome IV. 
    Jacq, C., Alt-Mörbe, J., Andre, B. et al. Nature 387 (Suppl 6632) (1997): 75–78.

  316. Human chromosome Y cosmid 30H9 genomic sequence. GenBank: accession number AC003031. 
    Shen, P., Chung, E., Hyman, R.W., Roberts, D., Schramm, S., Vollrath, D., Davis, R.W. (1997).

  317. Human chromosome Y cosmid 7A1 genomic sequence. GenBank: accession number AC003032. 
    Thorstenson, Y., Au, M., Chung, E., Hyman, R., Schramm, S., Vollrath, D., Davis, R.W. (1997).

  318. Human chromosome Y cosmid 16E4 genomic sequence. GenBank: accession number AC003094. 
    Hyman, R.W., Chung, E., Kurdi, O., Roberts, D., Schramm, S., Vollrath, D., Davis, R.W. (1997).

  319. Human chromosome Y cosmid 54E8 genomic sequence. GenBank: accession number AC003095. 
    Hyman, R.W., Vollrath, D., Davis, R.W. (1997).

  320. Human chromosome Y cosmid 56B5 genomic sequence. GenBank: accession number AC003097. 
    Lin, D., Chung, E., Hyman, R.W., Schramm, S., Vollrath, D., Davis, R.W. (1997).

  321. Human chromosome 1 BAC 13512 genomic sequence. GenBank: accession number AC003115. 
    Hyman, R.W., Babb, V., Chung, E., Kurdi, O., Rexan, M., Vollrath, D., Davis, R.W. (1997).

  322. Human chromosome 1 BAC 308G1 genomic sequence. GenBank: accession number AC003117. 
    Fan, J., Babb, V., Hyman, R.W., Kalman, S., Kurdi, O., Marathe, R., Rexan, M., Vollrath, D., Davis, R.W. (1997).

  323. Human chromosome 1 BAC 89N6 genomic sequence. GenBank: accession number AC003118. 
    Chung, E., Babb, V., Hyman, R.W., Kurdi, O., Rexan, M., Vollrath, D., Davis, Ronald W. (1997).

  324. Autosomal DNA haplotypes distinguish ancient human migrations. 
    Jin, L., Underhill, P.A., Doctor, V., Cavalli-Sforza, L.L., Davis, R., Oefner, P.J. Am. J. Hum. Genet 61 (1997): A201.

  325. An African origin of human Y chromosomes. 
    Underhill, P.A., Jin, L., Lin, A., Chan, C., Shen, P., Kauffman, E., Choi, L., Hurlbut, A., Cavalli-Sforza, L.L., Mehdi, S.Q., Jenkins, T., Seielstad, M.T., Wells, R.S., Ibrahim, M., Vollrath, D., Hyman, R., Davis, R., Oefner, P.J. Am. J. Hum. Genet 61 (1997): A18.

  326. CDP1, a novel Saccharomyces cerevisiae gene required for proper nuclear division and chromosome segregation. 
    Foreman, P.K. and Davis, R.W. Genetics 144.4 (1996): 1387-1397. [PubMed]

  327. Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. 
    Shoemaker, D.D., Lashkari, D.A., Morris, D., Mittmann, M. and Davis, R.W. Nature genetics 14.4 (1996): 450-456. [PubMed]

  328. Life with 6000 genes. 
    Goffeau, A., Barrell, B.G., Bussey, H., Davis, R.W., Dujon, B., Feldmann, H., Galibert, F., Hoheisel, J.D., Jacq, C., Johnston, M. and Louis, E.J. Science 274.5287 (1996): 546-567. [PubMed]

  329. Efficient random subcloning of DNA sheared in a recirculating point-sink flow system. 
    Oefner, P.J., Hunicke-Smith, S.P., Chiang, L., Dietrich, F., Mulligan, J. and Davis, R.W. Nucleic acids research 24.20 (1996): 3879-3886. [PubMed]

  330. Parallel human genome analysis: microarray-based expression monitoring of 1000 genes. 
    Schena, M., Shalon, D., Heller, R., Chai, A., Brown, P.O. and Davis, R.W. Proceedings of the National Academy of Sciences 93.20 (1996): 10614-10619. [PubMed]

  331. Application of DNA typing methods and genetic analysis to epidemiology and taxonomy of Saccharomyces. 
    Clemons, K.V., Park, P.S., McCusker, J.H., Davis, R.W., Stevens, D.A. J. Infec. Dis (1996).

  332. After period of gestation, DNA chips coming of age. 
    O’Connell, J.P., Davis, R.W., Chee, M., Lockhart, D.J., Fodor, S.P., and Collins, F. Chem. & Eng. News (1996).

  333. Yeast Artificial Chromosome (YAC) construction and applications. 
    Loehrlein, C. and Davis, R.W. (1996).

  334. Saccharomyces cerevisiae chromosome XVI left arm from MMN to PH085. Genbank: accession number U44030. 
    Dietrich, F.S., Allen, E., Araujo, R., Aparicio, A., Carpenter, J., Cherry, J.M., Chung, E., E., Davis, K., Duncan, M., Hunicke-Smith, S., Hyman, R.W., Kalman, S., Komp, C., Kurdi, O., Lashkari, D., Lew, H., Lin, A., Lin, D., Marathe, R., Mirtipati, S., Namath, A., Oefner, P., Petel, F., Roberts, D., Schramm, S., Schroeder, M., Botstein, D., Davis, Ronald W. (1996).

  335. Escherichia coli chromosome minutes 4-6. Genbank: accession number U70214. 
    Schramm, S., Duncan, M., Allen, E., Araujo, R., Aparicio, A., Chung, E., Davis, K., Federspiel, N., Hyman, R.W., Kalman, S., Komp, C., Kurdi, O., Lashkari, D., Lew, H., Lin, D., Namath, A., Oefner, P., Roberts, D., Davis, Ronald W. (1996).

  336. Escherichia coli chromosome minutes 6-8. Genbank: accession number U73857. 
    Duncan, M., Allen, E., Araujo, R., Aparicio, A., Chung, E., Davis, K., Federspiel, N., Hyman, R.W., Kalman, S., Komp, C., Kurdi, O., Lew, H., Lin, D., Namath, A., Oefner, P., Roberts, D., Schramm, S., Davis, Ronald W. (1996).

  337. Amassing a wealth of Y chromosome polymorphisms for evolutionary studies. 
    Underhill, P.A., Jin, L., Cavalli-Sforza, L.L., Davis, R., Oefner, P.J. Am. J. Hum. Genet 59 [Suppl.], A30 (1996).

  338. Sequencing the Chlamydia trachomatis Genome. 
    Kalman, S.S., Araujo, R., Chung, E., Dietrich, F., Komp, C., Otto, G., Lew, H., Lin, D., Marathe, R., Mirthipati, S., Namath, A., Oefner, P., Davis, R.W., Stephens, R. Microbial & Comparative Genomics 1 (1996): 236.

  339. Mapping and Sequencing of the Arabidopsis Genome. 
    Dewar, K., Dunn, P.J., Li, Y.-P., Kim, C.J., Ecker, J.R., Federspiel, N.A., Dietrich, F., Marziali, A., Oefner, P., Norgren, R., Davis, R.W., Vysotskaia, V., Yu, Q., Theologis, A. Microbial & Comparative Genomics 1 (1996): 204.

  340. High-Throughput Differential Genome Analysis by Denaturing HPLC. 
    Oefner, P.J., Underhill, P.A., Grill, E.A., Cho, R.J., Jin, L., Cavalli-Sforza, L.L., Davis, R.W. Microbial & Comparative Genomics 1 (1996): 245.

  341. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. 
    Schena, M., Shalon, D., Davis, R.W. and Brown, P.O. Science 270.5235 (1995): 467-470. [PubMed]

  342. An automated multiplex oligonucleotide synthesizer: development of high-throughput, low-cost DNA synthesis. 
    Lashkari, D.A., Hunicke-Smith, S.P., Norgren, R.M., Davis, R.W. and Brennan, T. Proceedings of the National Academy of Sciences 92.17 (1995): 7912-7915. [PubMed]

  343. Sliding-plate gel caster. 
    Lashkari, D.A., Norgren, R.M., Davis, R.W.18.4 (1995): 625-626. PMID: 7598894.

  344. Pathogenicity of Saccharomyces cerevisiae in complement factor five-deficient mice. 
    Byron, J.K., Clemons, K.V., McCusker, J.H., Davis, R.W. and Stevens, D.A. Infection and immunity 63.2 (1995): 478-485. [PubMed]

  345. The sequence of Saccharomyces cerevisiae chromosome IV right. Genbank: accession numbers U33057, U33050, U33007, U32274, and U43834. 
    Dietrich, F.S., Mulligan, J., Hennesy, K., Allen, E., Araujo, R., Aviles, E., Berno, A., Brennan, T., Carpenter, J., Chen, E., Cherry, J.M., Chung, E., Duncan, M., Guzman, E., Hartzell, G., Hunicke-Smith, S., Hyman, R.W., Kayser, A., Komp, C., Lashkari, D., Lew, H., Lin, D., Mosedale, D., Nakahara, K., Namath, A., Norgren, R., Oefner, P., Oh, C., Petel, F., Roberts, D., Sehl, P., Schramm, S., Shogren, T., Smith, V., Taylor, P., Wei, Y., Yelton, M., Botstein, D., Davis, Ronald W. (1995).

  346. Saccharomyces cerevisiae virulence phenotype as determined with CD-1 mice is associated with the ability to grow at 42 degrees C and form pseudohyphae. 
    McCusker, J.H., Clemons, K.V., Stevens, D.A. and Davis, R.W. Infection and immunity 62.12 (1994): 5447-5455. [PubMed]

  347. The TTG gene is required to specify epidermal cell fate and cell patterning in the Arabidopsis root. 
    Galway, M.E., Masucci, J.D., Lloyd, A.M., Walbot, V., Davis, R.W. and Schiefelbein, J.W. Developmental biology 166.2 (1994): 740-754. [PubMed]

  348. Epidermal cell fate determination in Arabidopsis: patterns defined by a steroid-inducible regulator 
    Lloyd, A.M., Schena, M., Walbot, V. and Davis, R.W. Science 266.5184 (1994): 436-439. [PubMed]

  349. Structure of homeobox-leucine zipper genes suggests a model for the evolution of gene families. 
    Schena, M. and Davis, R.W. Proceedings of the National Academy of Sciences 91.18 (1994): 8393-8397. [PubMed]

  350. Cloning vectors for the synthesis of epitope-tagged, truncated and chimeric proteins in Saccharomyces cerevisiae. 
    Foreman, P.K. and Davis, R.W. Gene 144.1 (1994): 63-68. [PubMed]

  351. Tetrad analysis possible in Arabidopsis with mutation of the QUARTET (QRT) genes. 
    Preuss, D., Rhee, S.Y. and Davis, R.W. Science 264.5164 (1994): 1458-1460. [PubMed]

  352. Genetic characterization of pathogenic Saccharomyces cerevisiae isolates. 
    McCusker, J.H., Clemons, K.V., Stevens, D.A. and Davis, R.W. Genetics 136.4 (1994): 1261-1269. [PubMed]

  353. Functional expression of the yeast FLP/FRT site-specific recombination system in Nicotiana tabacum. 
    Lloyd, A.M. and Davis, R.W. Molecular and General Genetics MGG 242 (1994): 653-657. [PubMed]

  354. Comparative pathogenesis of clinical and nonclinical isolates of Saccharomyces cerevisiae. 
    Clemons, K.V., McCusker, J.H., Davis, R.W. and Stevens, D.A. Journal of Infectious Diseases 169.4 (1994): 859-867. [PubMed]

  355. The complete sequence of Saccharomyces cerevisiae chromosome V. Genbank, : accession numbers U18795, U18779, U18530, U18778, U18796, U18813, U18814, U18839, U18916, U18917, and U18922. 
    Dietrich, F.S., Mulligan, J., Hennesy, K., Allen, E., Araujo, R., Aviles, E., Berno, A., Brennan, T., Carpenter, J., Chen, E., Cherry, J.M., Chung, E., Duncan, M., Guzman, E., Hartzell, G., Hunicke-Smith, S., Hyman, R.W., Kayser, A., Komp, C., Lashkari, D., Lew, H., Lin, D., Mosedale, D., Nakahara, K., Namath, A., Norgren, R., Oefner, P., Oh, C., Petel, F., Roberts, D., Sehl, P., Schramm, S., Shogren, T., Smith, V., Taylor, P., Wei, Y., Yelton, M., Botstein, D., Davis, Ronald W. (1994)

  356. Point mutations that separate the role of Saccharomyces cerevisiae centromere binding factor 1 in chromosome segregation from its role in transcriptional activation. 
    Foreman, P.K. and Davis, R.W. Genetics 135.2 (1993): 287-296. [PubMed]

  357. A conditional sterile mutation eliminates surface components from Arabidopsis pollen and disrupts cell signaling during fertilization. 
    Preuss, D., Lemieux, B., Yen, G. and Davis, R.W. Genes & development 7.6 (1993): 974-985. [PubMed]

  358. The HAT4 gene of Arabidopsis encodes a developmental regulator. 
    Schena, M., Lloyd, A.M. and Davis, R.W. Genes & development 7.3 (1993): 367-379. [PubMed]

  359. A dominant truncation allele identifies a gene, STE20, that encodes a putative protein kinase necessary for mating in Saccharomyces cerevisiae. 
    Ramer, S.W. and Davis, R.W. Proceedings of the National Academy of Sciences 90.2 (1993): 452-456.  [PubMed]

  360. Arabidopsis and Nicotiana anthocyanin production activated by maize regulators R and C1. 
    Lloyd, A.M., Walbot, V. and Davis, R.W.  Science 258.5089 (1992): 1773-1775. [PubMed]

  361. Dominant genetics using a yeast genomic library under the control of a strong inducible promoter. 
    R Ramer, S.W., Elledge, S.J. and Davis, R.W. Proceedings of the National Academy of Sciences 89.23 (1992): 11589-11593. [PubMed]

  362. ATP hydrolysis and the displaced strand are two factors that determine the polarity of RecA-promoted DNA strand exchange. 
    Konforti, B.B. and Davis, R.W. Journal of molecular biology 227.1 (1992): 38-53. [PubMed]

  363. HD-Zip proteins: members of an Arabidopsis homeodomain protein superfamily. 
    Schena, M. and Davis, R.W. Proceedings of the National Academy of Sciences 89.9 (1992): 3894-3898. [PubMed]

  364. Functional genetic expression of eukaryotic DNA in Escherichia coli. 1976. 
    Struhl, K., Cameron, J.R. & Davis, R.W. Biotechnology 24 (1976): 353-7. [no abstract available]

  365. A steroid-inducible gene expression system for plant cells. 
    Schena, M., Lloyd, A.M. & Davis, R.W. Proc Natl Acad Sci U S A 88, 10421-5 (1991). [PubMed]

  366. The use of proline as a nitrogen source causes hypersensitivity to, and allows more economical use of 5FOA in Saccharomyces cerevisiae. 
    McCusker, J.H. and Davis, R.W. Yeast 7.6 (1991): 607-608. [PubMed]

  367. Polymerase chain reaction mapping of yeast GAL7 mRNA polyadenylation sites demonstrates that 3' end processing in vitro faithfully reproduces the 3' ends observed in vivo. 
    Sadhale, P.P., Sapolsky, R., Davis, R.W., Butler, J.S. and Platt, T. Nucleic acids research 19.3 (1991): 3683-3688. [PubMed]

  368. DNA substrate requirements for stable joint molecule formation by the RecA and single-stranded DNA-binding proteins of Escherichia coli. 
    Konforti, B.B. and Davis, R.W.  Journal of Biological Chemistry 266.16 (1991): 10112-10121. [PubMed]

  369. The Saccharomyces cerevisiae RPB4 gene is tightly linked to the TIF2 gene. 
    Foreman, P.K., Davis, R.W. & Sachs, A.B. Nucleic Acids Res 19 (1991): 2781. [PubMed]

  370. Lambda YES: a multifunctional cDNA expression vector for the isolation of genes by complementation of yeast and Escherichia coli mutations. 
    Elledge, S.J., Mulligan, J.T., Ramer, S.W., Spottswood, M. and Davis, R.W. Proceedings of the National Academy of Sciences 88.5 (1991): 1731-1735. [PubMed]

  371. Gene isolation with lambda gt11 system. 
    Young, R.A. & Davis, R.W. Methods Enzymol 194 (1991): 230-8. [no abstract available]

  372. Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy. 
    Cai, M. and Davis, R.W. Cell 61.3 (1990): 437-446. [PubMed]

  373. Two genes differentially regulated in the cell cycle and by DNA-damaging agents encode alternative regulatory subunits of ribonucleotide reductase. 
    Elledge, S.J. and Davis, R.W. Genes & development 4.5 (1990): 740-751. [PubMed]

  374. The preference for a 3' homologous end is intrinsic to RecA-promoted strand exchange. 
    Konforti, B.B. and Davis, R.W. Journal of Biological Chemistry 265.12 (1990): 6916-6920. [PubMed]

  375. Translation initiation and ribosomal biogenesis: involvement of a putative rRNA helicase and RPL46. 
    Sachs, A.B. and Davis, R.W.  Science 247.4946 (1990): 1077-1079. [PubMed]

  376. Rain-, wind-, and touch-induced expression of calmodulin and calmodulin-related genes in Arabidopsis. 
    Braam, J. and Davis, R.W. Cell 60.3 (1990): 357-364. [PubMed]

  377. Gene targeting at the human CD4 locus by epitope addition. 
    Jasin, M., Elledge, S.J., Davis, R.W. and Berg, P. Genes & development 4.2 (1990): 157-166. [PubMed]

  378. Identification of the DNA damage-responsive element of RNR2 and evidence that four distinct cellular factors bind it. 
    Elledge, S.J. and Davis, R.W. Molecular and cellular biology (1989). [PubMed]

  379. DNA damage induction of ribonucleotide reductase. 
    Elledge, S.J. and Davis, R.W. Molecular and cellular biology 9.11 (1989): 4932-4940. [PubMed]

  380. The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation. 
    Sachs, A.B. and Davis, R.W. Cell 58.5 (1989): 857-867. [PubMed]

  381. Rapid screening of a human genomic library in yeast artificial chromosomes for single-copy sequences. 
    Traver, C.N., Klapholz, S., Hyman, R.W. and Davis, R.W. Proceedings of the National Academy of Sciences 86.15 (1989): 5898-5902. [PubMed]

  382. Purification of a yeast centromere-binding protein that is able to distinguish single base-pair mutations in its recognition site. 
    Cai, M. and Davis, R.W. Molecular and cellular biology (1989). [PubMed]

  383. Genetic selection for genes encoding sequence-specific DNA-binding proteins. 
    Elledge, S.J., Sugiono, P., Guarente, L. and Davis, R.W. Proceedings of the National Academy of Sciences 86.10 (1989): 3689-3693. [PubMed]

  384. Position and density effects on repression by stationary and mobile DNA-binding proteins. 
    Elledge, S.J. and Davis, R.W. “Position and density effects on repression by stationary and mobile DNA-binding proteins.” Genes & development 3.2 (1989): 185-197. [PubMed]

  385. Strategies for genetic modification of parasites. 
    Davis, R.W. Ann N Y Acad Sci 569 (1989): 104-17. [no abstract available]

  386. Molecular Analysis of Nitrate Regulation of Nitrate Reductase in Squash and Arabidopsis. 
    Crawford, N.M. and Davis, R.W. (1989).

  387. A family of versatile centromeric vectors designed for use in the sectoring-shuffle mutagenesis assay in Saccharomyces cerevisiae. 
    Elledge, S.J. and Davis, R.W. Gene 70.2 (1988): 303-312. [PubMed]

  388. Direction of chromosome rearrangements in Saccharomyces cerevisiae by use of his3 recombinational substrates. 
    Fasullo, M.T. and Davis, R.W. Molecular and cellular biology 8.10 (1988): 4370-4380. [PubMed]

  389. SPA1: a gene important for chromosome segregation and other mitotic functions in S. cerevisiae. 
    Snyder, M. and Davis, R.W. Cell 54.6 (1988): 743-754. [PubMed]

  390. Physical mapping of large DNA by chromosome fragmentation. 
    Vollrath, D., Davis, R.W., Connelly, C. and Hieter, P. Proceedings of the National Academy of Sciences 85.16 (1988): 6027-6031. [PubMed]

  391. Sequence and nitrate regulation of the Arabidopsis thaliana mRNA encoding nitrate reductase, a metalloflavoprotein with three functional domains. 
    Crawford, N.M., Smith, M., Bellissimo, D. and Davis, R.W. Proceedings of the National Academy of Sciences 85.14 (1988): 5006-5010.  [PubMed]

  392. Tandem array of human visual pigment genes at Xq28. 
    Vollrath, D., Nathans, J. and Davis, R.W. Science 240.4859 (1988): 1669-1672. [PubMed]

  393. Transcription interferes with elements important for chromosome maintenance in Saccharomyces cerevisiae. 
    Snyder M., Sapolsky R.J., Davis R.W. Mol Cell Biol. 8.5 (1988): 2184-2194. doi: 10.1128/mcb.8.5.2184-2194.1988. PMID: 3290652; PMCID: PMC363400. [PubMed]

  394. An electrophoretic karyotype of Neurospora crassa. 
    Orbach, M.J., Vollrath, D., Davis, R.W. and Yanofsky, C. Molecular and Cellular Biology 8.4 (1988)1469-1473. [PubMed]

  395. Defining Sequences that Protect Elements Important for Chromosome Maintenance from Transcriptional Interference in Saccharomyces Cerevisiae. 
    Snyder, M., Sapolsky, R.J., Davis, R.W. Mol. And Cell. Biol 8 (1988): 2184-2194.

  396. Genomic Organization of Two Families of Highly Repeated Nuclear DNA Sequences of Maize Selected Autonomous Replicating Activity in Yeast. 
    Berlani, R.E., Davis, R.W. and Walbot, V. Plant molecular biology 11 (1988): 161-172.

  397. Sequence Analysis of Three Fragments of Maize Nuclear DNA which Replicate Autonomously in Yeast. 
    Berlani, R.E., Walbot, V. and Davis, R.W. Plant molecular biology 11 (1988): 173-182.

  398. Plant Nitrate Reductase is a Tripartite Electron Transfer Protein That Belongs to the Cytochrome b5 Superfamily of Enzymes. 
    Crawford, N.M. and Davis, R.W. In Current topics in plant biochemistry and physiology, Proceedings of the Plant Biochemistry and Physiology Symposium held at the University of Missouri, Columbia (USA) (1988).

  399. Resolution of DNA molecules greater than 5 megabases by contour-clamped homogeneous electric fields. 
    Vollrath, D. and Davis, R.W. Nucleic Acids Research 15.19 (1987): 7865-7876. [PubMed]

  400. A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability. 
    Sachs, A.B., Davis, R.W. and Kornberg, R.D. Molecular and cellular biology 7.9 (1987): 3268-3276. [PubMed]

  401. Recombinational substrates designed to study recombination between unique and repetitive sequences in vivo. 
    Fasullo, M.T. and Davis, R.W. Proceedings of the National Academy of Sciences 84.17 (1987): 6215-6219. [PubMed]

  402. 3' homologous free ends are required for stable joint molecule formation by the RecA and single-stranded binding proteins of Escherichia coli. 
    Konforti, B.B. and Davis, R.W. Proceedings of the National Academy of Sciences 84.3 (1987): 690-694.  [PubMed]

  403. Lambda gt 11: gene isolation with antibody probes and other applications. 
    Snyder, M., Elledge, S., Sweetser, D., Young, R.A. and Davis, R.W. In Methods in enzymology Vol. 154. Academic Press (1987): 107-128.

  404. Identification and isolation of the gene encoding the small subunit of ribonucleotide reductase from Saccharomyces cerevisiae: DNA damage-inducible gene required for mitotic viability. 
    Elledge, S.J. and Davis, R.W. Molecular and cellular biology 7.8 (1987): 2783-2793. [PubMed]

  405. Genome Plasticity in Saccharomyces Cerevisiae. 
    Davis, R.W., Vollrath, D., Thomas, M., Hieter, P., Snyder, M., Mann, C. and Fasullo. Molecular Strategies of Parasitic Invasion Alan R. Liss, Inc. (1987): 17-27.  

  406. Plant Defense Genes are Regulated by Ethylene. 
    Ecker, J.R. and Davis, R.W. Proceedings of the National Academy of Sciences 84.15 (1987): 5202-5206. [PubMed]

  407. Separation of large DNA molecules by contour-clamped homogeneous electric fields. 
    Chu, G., Vollrath, D. and Davis, R.W. Science 234.4783 (1986): 1582-1585. [PubMed]

  408. Bent DNA at a yeast autonomously replicating sequence. 
    Snyder, M., Buchman, A.R. and Davis, R.W. Nature 324.6092 (1986): 87-89. [PubMed]

  409. Meiotic disjunction of circular minichromosomes in yeast does not require DNA homology. 
    Mann, C. and Davis, R.W. Proceedings of the National Academy of Sciences 83.16 (1986): 6017-6019. [PubMed]

  410. Rapid mapping of antigenic coding regions and constructing insertion mutations in yeast genes by mini-Tn10 "transplason" mutagenesis. 
    Snyder, M., Elledge, S. and Davis, R.W. Proceedings of the National Academy of Sciences 83.3 (1986): 730-734.  [PubMed]

  411. Structure and sequence of the centromeric DNA of chromosome 4 in Saccharomyces cerevisiae. 
    Mann, C. and Davis, R.W. Molecular and cellular biology 6.1 (1986): 241-245. [PubMed]

  412. Inhibition of Gene Expression in Plant Cells by Expression of Anti-Sense RNA. 
    Ecker, J.R. and Davis, R.W. Proceedings of the National Academy of Sciences 83.15 (1986): 5372-5376. [PubMed]

  413. Nitrate Reductase from Squash: cDNA Cloning and Nitrate Regulation. 
    Crawford, N.M., Campbell, W.H. and Davis, R.W. Proceedings of the National Academy of Sciences 83.21 (1986): 8073-8076. [PubMed]

  414. In Vitro and In Vivo Manipulation of Very Large DNA Molecules. 
    Davis, R.W., Vollrath, D., Chu, G., Fasullo, M., Hieter, P. and Thomas, M. DNA Probes: Applications in Genetic and Infectious Disease and Cancer (1986): 97.

  415. Isolation of the gene encoding yeast DNA polymerase I. 
    Johnson, L.M., Snyder, M., Chang, L.M., Davis, R.W. and Campbell, J.L. Cell 43.1 (1985): 369-377. [PubMed]

  416. Functional selection and analysis of yeast centromeric DNA. 
    Hieter, P., Pridmore, D., Hegemann, J.H., Thomas, M., Davis, R.W. and Philippsen, P. Cell 42.3 (1985): 913-921. [PubMed]

  417. Genes for the major protein antigens of the leprosy parasite Mycobacterium leprae. 
    Young, R.A., Mehra, V., Sweetser, D., Buchanan, T., Clark-Curtiss, J., Davis, R.W. and Bloom, B.R. Nature 316.6027 (1985): 450-452. [PubMed]

  418. Rapid induction of specific mRNAs by auxin in pea epicotyl tissue. 
    Theologis, A., Huynh, T.V. and Davis, R.W. Journal of molecular biology 183.1 (1985): 53-68. [PubMed]

  419. Dissection of Mycobacterium tuberculosis antigens using recombinant DNA. 
    Young, R.A., Bloom, B.R., Grosskinsky, C.M., Ivanyi, J., Thomas, D. and Davis, R.W.  Proceedings of the National Academy of Sciences 82.9 (1985): 2583-2587. [PubMed]

  420. Mitotic stability of yeast chromosomes: a colony color assay that measures nondisjunction and chromosome loss. 
    Hieter, P., Mann, C., Snyder, M. and Davis, R.W. Cell 40.2 (1985): 381-392. [PubMed]

  421. Construction and Screening cDNA Libraries in lgt10 and lgt11. 
    Huynh, T.V. DNA cloning 1 (1985): 49-78.

  422. Screening lgt11 expression libraries with antibody probes. 
    Snyder, M. and Davis, R.W. Hybridoma technology in the biosciences and medicine (1985): 397-406.

  423. Immunoscreening lgt11 recombinant DNA expression libraries. 
    Young, R.A. and Davis, R.W. Genetic engineering: principles and methods (1985): 29-41.

  424. Deletion of plasmid sequences during Saccharomyces cerevisiae transformation. 
    Clancy, S., Mann, C., Davis, R.W. and Calos, M.P. Journal of bacteriology 159.3 (1984): 1065-1067. [PubMed]

  425. Sequences that regulate the divergent GAL1-GAL10 promoter in Saccharomyces cerevisiae. 
    J Johnston, M. and Davis, R.W. Molecular and cellular biology 4.8 (1984): 1440-1448. [PubMed]

  426. Dissection Pathogen Antigens using Recombinant DNA. 
    Young, R. A. and Davis, R. W. New Approaches to Vaccine Development Schwabe & Co. AG. Basel (1984): 74-79.

  427. New Methods for Molecular DNA Cloning and Chromosome Manipulation. 
    Davis, R. W., Young, R. A. and Fasullo, M. Prontificia Academia Scientiarum 51 (1984): 123-134.

  428. Yeast RNA polymerase II genes: isolation with antibody probes. 
    Young, R.A. and Davis, R.W. Science 222.4625 (1983): 778-782. [PubMed]

  429. Targeted selection of recombinant clones through gene dosage effects. 
    Rine, J., Hansen, W., Hardeman, E. and Davis, R.W. Proceedings of the National Academy of Sciences 80.22 (1983): 6750-6754. [PubMed]

  430. RNA from the yeast transposable element Ty1 has both ends in the direct repeats, a structure similar to retrovirus RNA. 
    Elder, R.T., Loh, E.Y. and Davis, R.W. Proceedings of the National Academy of Sciences 80.9 (1983): 2432-2436. [PubMed]

  431. Efficient isolation of genes by using antibody probes. 
    Young, R.A. and Davis, R.W. Proceedings of the National Academy of Sciences 80.5 (1983): 1194-1198. [PubMed]

  432. Instability of dicentric plasmids in yeast. 
    Mann, C. and Davis, R.W. Proceedings of the National Academy of Sciences 80.1 (1983): 228-232. [PubMed]

  433. Reversion of a promoter deletion in yeast. 
    Scherer, S., Mann, C. and Davis, R.W. Nature 298.5877 (1982): 815-819. [PubMed]

  434. Centromeric DNA from Saccharomyces cerevisiae. 
    Stinchcomb, D.T., Mann, C. and Davis, R.W. Journal of molecular biology 158.2 (1982): 157-179. [PubMed]

  435. Zein storage protein gene family of maize. An assessment of heterogeneity with cloned messenger RNA sequences. 
    Burr, B., Burr, F.A., John, T.S., Thomas, M. and Davis, R.W. Journal of molecular biology 154.1 (1982): 33-49. 

  436. Principles and Practice of Recombinant DNA Research with Yeast. 
    Botstein, D. and Davis, R.W. The Molecular Biology of the Yeast Sacchromyces cerevisiae: Metabolism and Gene Expression (Strathern, JN, Jones, EW and Broach, JR, Eds.) (1982).  

  437. Recombinant DNA Techniques in Yeast. 
    Davis, R.W. and Johnston, H.M. In International symposium on genetics of industrial microorganisms 4 (1983):153-157.

  438. Position effects in Saccharomyces cerevisiae. 
    Struhl, K. & Davis, R.W. J Mol Biol 152 (1981): 569-75. [no abstract available]

  439. Promotor mutants of the yeast his3 gene. 
    Struhl, K. & Davis, R.W. J Mol Biol 152 (1981): 553-68. [no abstract available]

  440. Transcription of the his3 gene region in Saccharomyces cerevisiae. 
    Struhl, K. & Davis, R.W. J Mol Biol 152 (1981): 535-52. [no abstract available]

  441. Deletion analysis of the Saccharomyces GAL gene cluster. Transcription from three promoters. 
    St John, T.P., Scherer, S., McDonell, M.W. and Davis, R.W. Journal of Molecular Biology 152.2 (1981): 317-334.  

  442. The organization and transcription of the galactose gene cluster of Saccharomyces. 
    St John, T.P. and Davis, R.W. Journal of molecular biology 152.2 (1981): 285-315. 

  443. Studies on the transposable element Ty1 of yeast. I. RNA homologous to Ty1. II. Recombination and expression of Ty1 and adjacent sequences. 
    Elder, R.T., John, T.S., Stinchcomb, D.T. and Davis, R.W. In Cold Spring Harbor symposia on quantitative biology Vol. 45. Cold Spring Harbor Laboratory Press (1981): 581-591.

  444. Recombination of dispersed repeated DNA sequences in yeast. 
    Scherer, S. and Davis, R.W. Science 209.4463 (1980): 1380-1384. [PubMed]

  445. Conservation and DNA sequence arrangement of the DNA polymerase I gene region from Klebsiella aerogenes, Klebsiella pneumoniae and Escherichia coli. 
    Struhl, K. and Davis, R.W. Journal of Molecular Biology 141.4 (1980): 343-368.  

  446. Eukaryotic DNA segments capable of autonomous replication in yeast. 
    Stinchcomb, D.T., Thomas, M., Kelly, J., Selker, E. and Davis, R.W. Proceedings of the National Academy of Sciences 77.8 (1980): 4559-4563. [PubMed]

  447. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. 
    Botstein, D., White, R.L., Skolnick, M. and Davis, R.W. American journal of human genetics 32.3 (1980): 314. [PubMed]

  448. A physiological study of functional expression in Escherichia coli of the cloned yeast imidazoleglycerolphosphate dehydratase gene. 
    Struhl, K., Stinchcomb, D.T. and Davis, R.W. Journal of molecular biology 136.3 (1980): 291-307.  

  449. A physical, genetic and transcriptional map of the cloned his3 gene region of Saccharomyces cerevisiae. 
    Struhl, K. and Davis, R.W. Journal of molecular biology 136.3 (1980): 309-332.  

  450. Rapid DNA isolations for enzymatic and hybridization analysis. 
    Davis, R.W., Thomas, M., Cameron, J., John, T.P.S., Scherer, S. and Padgett, R.A. In Methods in enzymology Vol. 65. Academic Press (1980): 404-411.

  451. Isolation of galactose-inducible DNA sequences from Saccharomyces cerevisiae by differential plaque filter hybridization. 
    John, T.P.S. and Davis, R.W. Cell 16.2 (1979): 443-452. [PubMed]

  452. Sterile host yeasts (SHY): a eukaryotic system of biological containment for recombinant DNA experiments. 
    Botstein, D., Falco, S.C., Stewart, S.E., Brennan, M., Scherer, S., Stinchcomb, D.T., Struhl, K. and Davis, R.W. Gene 8.1 (1979): 17-24. [PubMed]

  453. Isolation and characterisation of a yeast chromosomal replicator. 
    Stinchcomb, D.T., Struhl, K. and Davis, R.W. Nature 282.5734 (1979): 39-43. [PubMed]

  454. Replacement of chromosome segments with altered DNA sequences constructed in vitro. 
    Scherer, S. and Davis, R.W. Proceedings of the National Academy of Sciences 76.10 (1979): 4951-4955. [PubMed]

  455. Suppression of a yeast amber mutation in Escherichia coli. 
    Struhl, K., Davis, R.W. and FINK, G.R. Nature 279.5708 (1979): 78-79. 

  456. Evidence for transposition of dispersed repetitive DNA families in yeast. 
    Cameron, J.R., Loh, E.Y. and Davis, R.W. Cell 16.4 (1979): 739-751. [PubMed]

  457. High-frequency transformation of yeast: autonomous replication of hybrid DNA molecules. 
    Struhl, K., Stinchcomb, D.T., Scherer, S. and Davis, R.W. Proceedings of the National Academy of Sciences 76.3 (1979): 1035-1039. [PubMed]

  458. Cloning of the yeast tyrosine transfer RNA genes in bacteriophage lambda. 
    Olson, M.V., Hall, B.D., Cameron, J.R. and Davis, R.W. Journal of Molecular Biology 127.3 (1979): 285-295.  

  459. Structural and Functional Analysis of the His3 Gene and Galactose Inducible Sequences in Yeast. 
    Davis, R., John, T.S., Struhl, K., Stinchcomb, D., Scherer, S. and McDonell, M. In Eucaryotic Gene Regulation. Academic Press (1979): 51-55

  460. Unique arrangement of coding sequences for 5 S, 5.8 S, 18 S and 25 S ribosomal RNA in Saccharomyces cerevisiae as determined by R-loop and hybridization analysis. 
    Philippsen, P., Thomas, M., Kramer, R.A. and Davis, R.W. Journal of molecular biology 123.3 (1978): 387-404. 

  461. Cloning of the yeast ribosomal DNA repeat unit in SstI and HindIII lambda vectors using genetic and physical size selections. 
    Philippsen, P., Kramer, R.A. and Davis, R.W. “Cloning of the yeast ribosomal DNA repeat unit in SstI and HindIII lambda vectors using genetic and physical size selections.” Journal of molecular biology 123.3 (1978): 371-386.  

  462. Divergent transcription in the yeast ribosomal RNA coding region as shown by hybridization to separated strands and sequence analysis of cloned DNA. 
    Kramer, R.A., Philippsen, P. and Davis, R.W. Journal of molecular biology 123.3 (1978): 405-416.

  463. A new electron microscopic technique for establishing the positions of genes: an analysis of the yeast ribosomal RNA coding region. 
    Ferguson, J. and Davis, R.W. Journal of molecular biology 123.3 (1978): 417-430.  

  464. Quantitative Electron Microscopy of Nucleic Acids. 
    Ferguson, J. and Davis, R.W. In Advanced Techniques in Biological Electron Microscopy II: Specific Ultrastructural Probes. Berlin, Heidelberg: Springer Berlin Heidelberg (1978): 123-171 

  465. Production of a functional eukaryotic enzyme in Escherichia coli: cloning and expression of the yeast structural gene for imidazole-glycerolphosphate dehydratase (his3). 
    Struhl, K. and Davis, R.W. Proceedings of the National Academy of Sciences 74.12 (1977): 5255-5259. [PubMed]

  466. The effects of Escherichia coli and yeast DNA insertions on the growth of lambda bacteriophage. 
    Cameron, J.R. and Davis, R.W. Science 196.4286 (1977): 212-215. [PubMed]

  467. Five hundredfold overproduction of DNA ligase after induction of a hybrid lambda lysogen constructed in vitro. 
    Panasenko, S.M., Cameron, J.R., Davis, R.W. and Lehman, I.R. Science 196.4286 (1977):188-189. [PubMed]

  468. Screening lambdagt recombinant clones by hybridization to single plaques in situ. 
    Benton, W.D. and Davis, R.W. Science 196.4286 (1977): 180-182.  

  469. Analysis of chromosomal integration and deletions of yeast plasmids. 
    Cameron, J.R., Philippsen, P. and Davis, R.W. Nucleic Acids Research 4.5 (1977): 1429-1448. [PubMed]

  470. Cloning of Satillite DNA Sequences with the l Vector lgt-araB. 
    Phillipsen, P., Lee, C.S., and Davis, R.W. Eukaryotic Genetic System: ICN-UCLA Symposia on Molecular and Cellular Biology VIII (1977): 63-72. 

  471. Genetic and Physical Selection of Eukaryotic Genes Cloned in E. coli. 
    Davis, R. W., Thomas, M., Cameron, J. R., Philippsen, P., Kramer, R., St. John, T., Stuhl, K., and Ferguson, J. ed. P. Ts'O, Elsevier North-Holland Biomedical Press (1977):16-27.

  472. Rapid Selection and screening Methods for the Isolation of Particular Cloned Eukaryotic DNA Sequences. 
    Davis, R.W., Thomas, M., Benton, D., Cameron, J., Philippsen, P., Struhl, K., John, T.S. and Kramer, R. In Molecular Cloning of Recombinant DNA. Academic Press, New York (1977): 155-160.  

  473. Hybridization of RNA to double-stranded DNA: formation of R-loops. 
    Thomas, M., White, R.L. and Davis, R.W. Proceedings of the National Academy of Sciences 73.7 (1976): 2294-2298. [PubMed]

  474. Functional genetic expression of eukaryotic DNA in Escherichia coli. 
    Struhl, K., Cameron, JR., Davis R.W.  Proc Natl Acad Sci USA 73.5 (1976): 1471-5. doi: 10.1073/pnas.73.5.1471. PMID: 775490; PMCID: PMC430318. [PubMed]

  475. Kinetic Studies on the Hybridization of RNA to Double Stranded DNA. 
    Thomas, M., White, R.L. and Davis, R.W. In Molecular Mechanisms in the Control of Gene Expression. Academic Press (1976): 427-444. 

  476. Genetic Selections and the Cloning of Prokaryotic and Eukaryotic Genes. 
    Struhl, K. and Davis, R.W. In Molecular Mechanisms in the Control of Gene Expression. Academic Press (1976): 495-506.

  477. Isolation of bacteriophage lambda containing yeast ribosomal RNA genes: screening by in situ RNA hybridization to plaques. 
    Kramer, R.A., Cameron, J.R. and Davis, R.W. Cell 8.2 (1976): 227-232. [PubMed]

  478. Determination of DNA concentration by electron microscopy. 
    Raleigh, E.A. and Davis, R.W. Analytical Biochemistry 72.1-2 (1976): 460-467.

  479. Cloning of the Ribosomal RNA Genes of Yeast. 
    Kramer, R., Philippsen, P., Cameron, J. and Davis, R.W. In Molecular Mechanisms in the Control of Gene Expression. Academic Press (1976): 581-585.

  480. In vitro construction of bacteriophage lambda carrying segments of the Escherichia coli chromosome: selection of hybrids containing the gene for DNA ligase. 
    Cameron, J.R., Panasenko, S.M., Lehman, I.R. and Davis, R.W. Proceedings of the National Academy of Sciences 72.9 (1975): 3416-3420. [PubMed]

  481. EcoRI endonuclease cleavage map of bacteriophage P4-DNA. 
    Goldstein, L., Thomas, M. and Davis, R.W. Virology 66.2 (1975): 420-427.

  482. An electron microscopic method for studying and mapping the region of weak sequence homology between simian virus 40 and polyoma DNAs. 
    Ferguson, J. and Davis, R.W. Journal of Molecular Biology 94.2 (1975): 135-149. 

  483. T antigen binds to simian virus 40 DNA at the origin of replication. 
    Reed, S.I., Ferguson, J., Davis, R.W. and Stark, G.R. Proceedings of the National Academy of Sciences 72.4 (1975) 1605-1609. [PubMed]

  484. Studies on the cleavage of bacteriophage lambda DNA with EcoRI Restriction endonuclease. 
    Thomas, M. and Davis, R.W. Journal of Molecular Biology 91.3 (1975): 315-328.  

  485. Isolation and characterization of individual clones of simian virus 40 mutants containing deletions duplications and insertions in their DNA. 
    Mertz, J.E., Carbon, J., Herzberg, M., Davis, R.W. and Berg, P. In Cold Spring Harbor Symposia on Quantitative Biology Vol. 39. Cold Spring Harbor Laboratory Press (1974): 69-84. 

  486. Action of Escherichia coli P1 restriction endonuclease on simian virus 40 DNA. 
    Risser, R., Hopkins, N., Davis, R.W., Delius, H. and Mulder, C. Journal of Molecular Biology 89.4 (1975): 517-544. 

  487. Viable molecular hybrids of bacteriophage lambda and eukaryotic DNA. 
    Thomas, M., Cameron, J.R. and Davis, R.W. Proceedings of the National Academy of Sciences 71.11 (1974): 4579-4583.

  488. Potential biohazards of recombinant DNA molecules. 
    Berg, P., Baltimore, D., Boyer, H.W., Cohen, S.N., Davis, R.W., Hogness, D.S., Nathans, D., Roblin, R., Watson, J.D., Weissman, S. & Zinder, N.D. Letter: Science 185 (1974): 303.

  489. Cleavage of DNA by RI restriction endonuclease generates cohesive ends. 
    Mertz, J.E. and Davis, R.W. Proceedings of the national academy of sciences 69.11 (1972): 3370-3374.  

  490. Electron Microscopy Heteroduplex Methods for Mapping Regions of Base Sequence Homology in Nucleic Acids. 
    Davis, R.W., Simon, M. and Davidson, N. In Methods in enzymology. Vol. 21. Academic Press (1971): 413-428.

  491. A study in evolution: the DNA base sequence homology between coliphages T7 and T3. 
    Davis, R.W. and Hyman, R.W. Journal of molecular biology 62.2 (1971): 287-301.

  492. Dual control of arabinose genes on transducing phage lambda-dara. 
    Schleif, R., Greenblatt, J. and Davis, R.W. Journal of Molecular Biology 59.1 (1971): 127-150.

  493. Deletion mutants of bacteriophage lambda. 3. Physical structure of att-phi. 
    Davis, R.W. and Parkinson, J.S. Journal of molecular biology 56.2 (1971): 403-423.

  494. Electron Microscope Heteroduplex Studies of Sequence Relations of the DNA Molecules of Lambdoid Phages. 
    Simon, M.N., Davis, R.W. and Davidson, N. In The bacteriophage lambda. Cold Spring Harbor Laboratory Cold Spring Harbor, NY (1971): 313-328.

  495. A physical map of the left arm of the lambda chromosome. 
    Parkinson, J.S. and Davis, R.W. Journal of Molecular Biology 56.2 (1971): 425-428.  

  496. A physical study by electron microscopy of the terminally reptitious, circularly permuted DNA from the coliphage particles of Escherichia coli 15. 
    Lee, C.S., Davis, R.W. and Davidson, N. Journal of molecular biology 48.1, (1970): 1-22. 

  497. Homology and structural relationships between the dimeric and monomeric circular forms of mitochondrial DNA from human leukemic leukocytes. 
    Clayton, D.A., Davis, R.W. and Vinograd, J. Journal of molecular biology 47.2 (1970): 137-153. 

  498. The Physical Location of the In Vitro RNA Initiation Site and Termination Sites of T7M DNA. 
    Davis, R.W. and Hyman, R.W. In Cold Spring Harbor Symposia on Quantitative Biology. Vol. 35. Cold Spring Harbor Laboratory Press (1970). (1970).

  499. The process of infection with Bacteriophage phi-X174. XXIX. In vivo studies on the synthesis of the single-stranded DNA of progeny phi-X174 bacteriophage. 
    Knippers, R., Razin, A., Davis, R. and Sinsheimer, R.L. Journal of Molecular Biology 45.2 (1969): 237-263.  

  500. Electron-microscopic visualization of deletion mutations. 
    Davis, R.W. and Davidson, N. Proceedings of the National Academy of Sciences 60.1 (1968): 243-250.

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