CVI Member Publications

December 2013

CVI members (indicated in bold) had 80 publications in December 2013:

1. American Journal of Nuclear Medicine and Molecular Imaging: Editorial Board (2014) e-Century Publishing Corporation.
  Seto B, Jacobs PM, Mach RH, Bulte JW, Cai W, Alavi A, Divgi CR, Wu JC.
  Am J Nucl Med Mol Imaging. 2013 Dec 15;4(1):89-95.
2. Water access points and hydration pathways in CLC H+/Cl- transporters.
  Han W, Cheng RC, Maduke MC, Tajkhorshid E.
  Proc Natl Acad Sci U S A. 2013 Dec 30. [Epub ahead of print]
3. Predictors of Bronchopulmonary Dysplasia or Death in Premature Infants with a Patent Ductus Arteriosus.
  Chock VY, Punn R, Oza A, Benitz WE, Van Meurs KP, Whittemore AS, Behzadian F, Silverman NH.
  Pediatr Res. 2013 Dec 30. [Epub ahead of print]
4. Cancer Therapy-Induced Left Ventricular Dysfunction: Interventions and Prognosis.
  Thakur A, Witteles RM.
  J Card Fail. 2013 Dec 27. [Epub ahead of print]
5. Graphite Oxide Nanoparticles with Diameter Greater than 20 nm Are Biocompatible with Mouse Embryonic Stem Cells and Can Be Used in a Tissue Engineering System.
  Wang IN, Robinson JT, Do G, Hong G, Gould DR, Dai H, Yang PC.
  Small. 2013 Dec 23. [Epub ahead of print]
6. Fast pediatric 3D free-breathing abdominal dynamic contrast enhanced MRI with high spatiotemporal resolution.
  Zhang T, Cheng JY, Potnick AG, Barth RA, Alley MT, Uecker M, Lustig M, Pauly JM, Vasanawala SS.
  J Magn Reson Imaging. 2013 Dec 21. [Epub ahead of print]
7. Determinants of mortality among postmenopausal women who report rheumatoid arthritis in the Women's Health Initiative.
  Kuller LH, Mackey RH, Walitt BT, Deane KD, Holers VM, Robinson WH, Sokolove J, Chang Y, Liu S, Parks CG, Wright NC, Moreland LW.
  Arthritis Rheum. 2013 Dec 23. [Epub ahead of print]
8. Gli Protein Activity Is Controlled by Multisite Phosphorylation in Vertebrate Hedgehog Signaling.
  Niewiadomski P, Kong JH, Ahrends R, Ma Y, Humke EW, Khan S, Teruel MN, Novitch BG, Rohatgi R.
  Cell Rep. 2013 Dec 24. [Epub ahead of print]
9. Investigation of maternal environmental exposures in association with self-reported preterm birth.
  Patel CJ, Yang T, Hu Z, Wen Q, Sung J, El-Sayed YY, Cohen H, Gould J, Stevenson DK, Shaw GM, Ling XB, Butte AJ; on behalf of the March of Dimes Prematurity Research Center at Stanford University School of Medicine.
  Reprod Toxicol. 2013 Dec 26. [Epub ahead of print]
10. A child with purulent pericarditis and Streptococcus intermedius in the presence of a pericardial teratoma: An unusual presentation.
  Presnell L, Maeda K, Griffin M, Axelrod D.
  J Thorac Cardiovasc Surg. 2013 Dec 24. [Epub ahead of print] No abstract available.
11. Patients with single distal MCA perfusion lesions have a high rate of good outcome with or without reperfusion.
  Lemmens R, Christensen S, Straka M, De Silva DA, Mlynash M, Campbell BC, Bammer R, Olivot JM, Desmond P, Marks MP, Davis SM, Donnan GA, Albers GW, Lansberg MG.
  Int J Stroke. 2013 Dec 23. [Epub ahead of print]
12. Septal Curvature Is Marker of Hemodynamic, Anatomical, and Electromechanical Ventricular Interdependence in Patients with Pulmonary Arterial Hypertension.
  Haddad F, Guihaire J, Skhiri M, Denault AY, Mercier O, Al-Halabi S, Vrtovec B, Fadel E, Zamanian RT, Schnittger I.
  Echocardiography. 2013 Dec 23. [Epub ahead of print]
13. A penile spine/vibrissa enhancer sequence is missing in modern and extinct humans but is retained in multiple primates with penile spines and sensory vibrissae.
  Reno PL, McLean CY, Hines JE, Capellini TD, Bejerano G, Kingsley DM.
  PLoS One. 2013 Dec 19;8(12):e84258.
15. Is the simplest chemical reaction really so simple?
  Jankunas J, Sneha M, Zare RN, Bouakline F, Althorpe SC, Herráez-Aguilar D, Aoiz FJ.
  Proc Natl Acad Sci U S A. 2013 Dec 23. [Epub ahead of print]
16. Designing ECM-mimetic Materials Using Protein Engineering.
  Cai L, Heilshorn SC.
  Acta Biomater. 2013 Dec 20. [Epub ahead of print]
18. Tissue changes, bioimpedance, and acquired lymphedema.
  Rockson SG.
  Lymphat Res Biol. 2013 Dec;11(4):195. No abstract available.
19. Grafting of Crosslinked Hydrogel Networks to Titanium Surfaces.
  Muir BV, Myung D, Knoll W, Frank CW.
  ACS Appl Mater Interfaces. 2013 Dec 23. [Epub ahead of print]
21. Emotion Dysregulation and the Core Features of Autism Spectrum Disorder.
  Samson AC, Phillips JM, Parker KJ, Shah S, Gross JJ, Hardan AY.
  J Autism Dev Disord. 2013 Dec 21. [Epub ahead of print]
22. Outcome and clinical significance of delayed endoleaks after endovascular aneurysm repair.
  Zhou W, Blay E Jr, Varu V, Ali S, Jin MQ, Sun L, Joh JH.
  J Vasc Surg. 2013 Dec 18. [Epub ahead of print]
23. Induced Pluripotent Stem Cells in Regenerative Medicine and Disease Modeling.
  Walmsley GG, Hyun J, McArdle A, Senarath-Yapa K, Hu MS, Chung MT, Wong VW, Longaker MT, Wan DC.
  Curr Stem Cell Res Ther. 2013 Dec 16. [Epub ahead of print]
24. Identification of common blood gene signatures for the diagnosis of renal and cardiac acute allograft rejection.
  Li L, Khush K, Hsieh SC, Ying L, Luikart H, Sigdel T, Roedder S, Yang A, Valantine H, Sarwal MM.
  PLoS One. 2013 Dec 16;8(12):e82153.
25. Relevant issues in the pathology and pathobiology of pulmonary hypertension.
  Tuder RM, Archer SL, Dorfmüller P, Erzurum SC, Guignabert C, Michelakis E, Rabinovitch M, Schermuly R, Stenmark KR, Morrell NW.
  J Am Coll Cardiol. 2013 Dec 24;62(25 Suppl):D4-D12. 
26. Right heart adaptation to pulmonary arterial hypertension: physiology and pathobiology.
  Vonk-Noordegraaf A, Haddad F, Chin KM, Forfia PR, Kawut SM, Lumens J, Naeije R, Newman J, Oudiz RJ, Provencher S, Torbicki A, Voelkel NF, Hassoun PM.
  J Am Coll Cardiol. 2013 Dec 24;62(25 Suppl):D22-33.
27. REEP1 and REEP2 proteins are preferentially expressed in neuronal and neuronal-like exocytotic tissues.
  Hurt CM, Björk S, Ho VK, Gilsbach R, Hein L, Angelotti T.
  Brain Res. 2013 Dec 16. [Epub ahead of print]
28. Correlation of AOL recanalization, TIMI reperfusion and TICI reperfusion with infarct growth and clinical outcome.
  Marks MP, Lansberg MG, Mlynash M, Kemp S, McTaggart R, Zaharchuk G, Bammer R, Albers GW; for the DEFUSE 2 Investigators.
  J Neurointerv Surg. 2013 Dec 18. [Epub ahead of print]
29. Stem cells catalyze cartilage formation by neonatal articular chondrocytes in 3D biomimetic hydrogels.
  Lai JH, Kajiyama G, Smith RL, Maloney W, Yang F.
  Sci Rep. 2013 Dec 19;3:3553.
30. The glycolytic enzyme PFKFB3/phosphofructokinase regulates autophagy.
  Yang Z, Goronzy JJ, Weyand CM.
  Autophagy. 2013 Dec 17;10(2). [Epub ahead of print] Review.
32. Photo-crosslinkable PEG-Based Microribbons for Forming 3D Macroporous Scaffolds with Decoupled Niche Properties.
  Han LH, Tong X, Yang F.
  Adv Mater. 2013 Dec 17. [Epub ahead of print]
33. Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways.
  Kohlhoff KJ, Shukla D, Lawrenz M, Bowman GR, Konerding DE, Belov D, Altman RB, Pande VS.
  Nat Chem. 2014 Jan;6(1):15-21. Epub 2013 Dec 15.
34. Systematic evaluation of environmental and behavioural factors associated with all-cause mortality in the United States National Health and Nutrition Examination Survey.
  Patel CJ, Rehkopf DH, Leppert JT, Bortz WM, Cullen MR, Chertow GM, Ioannidis JP.
  Int J Epidemiol. 2013 Dec 16. [Epub ahead of print]
35. Bronchiolitis: Doing Less and Still Getting Better.
  Cornfield DN.
  Pediatrics. 2013 Dec 16. [Epub ahead of print] No abstract available.
36. Association Between Pediatric Clinical Trials and Global Burden of Disease.
  Bourgeois FT, Olson KL, Ioannidis JP, Mandl KD.
  Pediatrics. 2013 Dec 16. [Epub ahead of print]
37. A genome-wide copy number association study of osteoporotic fractures points to the 6p25.1 locus.
  Oei L, Hsu YH, Styrkarsdottir U, [+61 authors], Ioannidis JP, Kiel DP, Rivadeneira F, Estrada K.
  J Med Genet. 2013 Dec 16. doi: 10.1136/jmedgenet-2013-102064. [Epub ahead of print]
38. Engineering of three-dimensional microenvironments to promote contractile behavior in primary intestinal organoids.
  Dimarco RL, Su J, Yan KS, Dewi R, Kuo CJ, Heilshorn SC.
  Integr Biol (Camb). 2013 Dec 17. [Epub ahead of print]
39. Coronary artery bypass graft type and outcomes in maintenance dialysis.
  Shilane D, Hlatky MA, Winkelmayer WC, Chang TI.
  J Cardiovasc Surg (Torino). 2013 Dec 17. [Epub ahead of print]
41. Assessment of osteoarthritis candidate genes in a meta-analysis of 9 genome-wide association studies.
  Rodriguez-Fontenla C, Calaza M, Evangelou E, [+34 authors]; the arcOGEN consortium, Felson DT, Ioannidis JP, Loughlin J, Metspalu A, Meulenbelt I, Stefansson K, van Meurs JB, Zeggini E, Spector TD, Gonzalez A.
  Arthritis Rheum. 2013 Dec 10. [Epub ahead of print]
42. Evaluation of σ-1 Receptor Radioligand 18F-FTC-146 in Rats and Squirrel Monkeys Using PET.
  James ML, Shen B, Nielsen CH, Behera D, Buckmaster CL, Mesangeau C, Zavaleta C, Vuppala PK, Jamalapuram S, Avery BA, Lyons DM, McCurdy CR, Biswal S, Gambhir SS, Chin FT.
  J Nucl Med. 2013 Dec 12. [Epub ahead of print]
43. Release kinetics of circulating cardiac myosin binding protein-C following cardiac injury.
  Kuster D, Cardenas-Ospina A, Miller L, Liebetrau C, Troidl C, Nef HM, Möllmann H, Hamm CW, Pieper KS, Mahaffey KW, Kleiman NS, Stuyvers BD, Marian AJ, Sadayappan S.
  Am J Physiol Heart Circ Physiol. 2013 Dec 13. [Epub ahead of print]
44. Characterization of a Fluorescent Probe for Imaging Nitric Oxide.
  Ghebremariam YT, Huang NF, Kambhampati S, Volz KS, Joshi GG, Anslyn EV, Cooke JP.
  J Vasc Res. 2013 Dec 11;51(1):68-79. [Epub ahead of print]
45. Germline Signaling Mediates the Synergistically Prolonged Longevity Produced by Double Mutations in daf-2 and rsks-1 in C. elegans.
  Chen D, Li PW, Goldstein BA, Cai W, Thomas EL, Chen F, Hubbard AE, Melov S, Kapahi P.
  Cell Rep. 2013 Dec 26;5(6):1600-10. Epub 2013 Dec 12.
47. Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains.
  Takebayashi SI, Lei I, Ryba T, Sasaki T, Dileep V, Battaglia D, Gao X, Fang P, Fan Y, Esteban MA, Tang J, Crabtree GR, Wang Z, Gilbert DM.
  Epigenetics Chromatin. 2013 Dec 13;6(1):42. [Epub ahead of print]
48. Feasibility and Acceptability of a Collaborative Care Intervention to Improve Symptoms and Quality of Life in Chronic Heart Failure: Mixed Methods Pilot Trial.
  Bekelman DB, Hooker S, Nowels CT, Main DS, Meek P, McBryde C, Hattler B, Lorenz KA, Heidenreich PA.
  J Palliat Med. 2013 Dec 11. [Epub ahead of print]
49. Exercise capacity and paroxysmal atrial fibrillation in patients with hypertrophic cardiomyopathy.
  Azarbal F, Singh M, Finocchiaro G, Le VV, Schnittger I, Wang P, Myers J, Ashley E, Perez M.
  Heart. 2013 Dec 10. [Epub ahead of print]
50. Pancreatic beta cell function following liraglutide-augmented weight loss in individuals with prediabetes: analysis of a randomised, placebo-controlled study.
  Kim SH, Liu A, Ariel D, Abbasi F, Lamendola C, Grove K, Tomasso V, Reaven G.
  Diabetologia. 2013 Dec 11. [Epub ahead of print]
51. The combination of 9p21.3 genotype and biomarker profile improves a peripheral artery disease risk prediction model.
  Downing KP, Nead KT, Kojima Y, Assimes T, Maegdefessel L, Quertermous T, Cooke JP, Leeper NJ.
  Vasc Med. 2013 Dec 9. [Epub ahead of print]
52. The emerging field of affective science.
  Gross JJ, Barrett LF.
  Emotion. 2013 Dec;13(6):997-8.
53. Regulation of Beta-2-Adrenergic Receptor Function by Conformationally Selective Single-domain Intrabodies.
  Staus DP, Wingler LM, Strachan RT, Rasmussen SG, Pardon E, Ahn S, Steyaert J, Kobilka BK, Lefkowitz RJ.
  Mol Pharmacol. 2013 Dec 6. [Epub ahead of print]
54. Clinical Reminders to Providers of Patients with Reduced Left Ventricular Ejection Fraction Increase Defibrillator Referral: A Randomized Trial.
  Gupta A, Gholami P, Turakhia MP, Friday K, Heidenreich PA.
  Circ Heart Fail. 2013 Dec 6. [Epub ahead of print]
55. Adipose Tissue Macrophages: Amicus adipem?
  Odegaard JI, Ganeshan K, Chawla A.
  Cell Metab. 2013 Dec 3;18(6):767-8. 
56. Concurrent Generation of Functional Smooth Muscle and Endothelial Cells via a Vascular Progenitor.
  Marchand M, Anderson EK, Phadnis SM, Longaker MT, Cooke JP, Chen B, Reijo Pera RA.
  Stem Cells Transl Med. 2013 Dec 5. [Epub ahead of print]
57. Interfollicular epidermal stem cells self-renew via autocrine Wnt signaling.
  Lim X, Tan SH, Koh WL, Chau RM, Yan KS, Kuo CJ, van Amerongen R, Klein AM, Nusse R.
  Science. 2013 Dec 6;342(6163):1226-30. 
58. Essential Role of Apelin Signaling During Lymphatic Development in Zebrafish.
  Kim JD, Kang Y, Kim J, Papangeli I, Kang H, Wu J, Park H, Nadelmann E, Rockson SG, Chun HJ, Jin SW.
  Arterioscler Thromb Vasc Biol. 2013 Dec 5. [Epub ahead of print]
59. Potential increased risk of cancer from commonly used medications: an umbrella review of meta-analyses.
  Ioannidis JP, Zhou Y, Chang CQ, Schully SD, Khoury MJ, Freedman AN.
  Ann Oncol. 2014 Jan;25(1):16-23. Epub 2013 Dec 4.
60. Harnessing the Stem Cell Potential: A case for neural stem cell therapy.
  Yang N, Wernig M.
  Nat Med. 2013 Dec 5;19(12):1580-1. No abstract available.
61. DICE, an efficient system for iterative genomic editing in human pluripotent stem cells.
  Zhu F, Gamboa M, Farruggio AP, Hippenmeyer S, Tasic B, Schüle B, Chen-Tsai Y, Calos MP.
  Nucleic Acids Res. 2013 Dec 4. [Epub ahead of print]
62. Efficacy and safety of rivaroxaban compared with warfarin in patients with peripheral artery disease and non-valvular atrial fibrillation: insights from ROCKET AF.
  Jones WS, Hellkamp AS, Halperin J, Piccini JP, Breithardt G, Singer DE, Fox KA, Hankey GJ, Mahaffey KW, Califf RM, Patel MR.
  Eur Heart J. 2013 Dec 2. [Epub ahead of print]
63. Unexplained Double-Chambered Left Ventricle Associated with Contracting Right Ventricular Aneurysm and Right Atrial Enlargement.
  Finocchiaro G, Murphy D, Pavlovic A, Haddad F, Shiran H, Sinagra G, Ashley EA, Knowles JW.
  Echocardiography. 2013 Dec 3. [Epub ahead of print]
64. Genetics and genomics for the prevention and treatment of cardiovascular disease: update: a scientific statement from the american heart association.
  Ganesh SK, Arnett DK, Assimes TL, Basson CT, Chakravarti A, Ellinor PT, Engler MB, Goldmuntz E, Herrington DM, Hershberger RE, Hong Y, Johnson JA, Kittner SJ, McDermott DA, Meschia JF, Mestroni L, O'Donnell CJ, Psaty BM, Vasan RS, Ruel M, Shen WK, Terzic A, Waldman SA; American Heart Association Council on Functional Genomics and Translational Biology, Council on Epidemiology and Prevention, Council on Basic Cardiovascular Sciences, Council on Cardiovascular Disease in the Young, Council on Cardiovascul.
  Circulation. 2013 Dec 24;128(25):2813-51. Epub 2013 Dec 2.
65. Identification of anticitrullinated protein antibody reactivities in a subset of anti-CCP-negative rheumatoid arthritis: association with cigarette smoking and HLA-DRB1 'shared epitope' alleles.
  Wagner CA, Sokolove J, Lahey LJ, Bengtsson C, Saevarsdottir S, Alfredsson L, Delanoy M, Lindstrom TM, Walker RP, Bromberg R, Chandra PE, Binder SR, Klareskog L, Robinson WH.
  Ann Rheum Dis. 2013 Dec 2. [Epub ahead of print]
66. Response.
  Xu Y, Zheng M, Khuong A, Merritt RE, Shrager JB, Wakelee HA, Kratzke RA, Hoang CD.
  Chest. 2013 Dec 1;144(6):1971-2. No abstract available.
67. Impact of type 2 diabetes susceptibility variants on quantitative glycemic traits reveals mechanistic heterogeneity.
  Dimas AS, Lagou V, Barker A, Knowles JW, [+11 authors], Assimes TL, [+29 authors], Quertermous T, Lind L, Hansen T, Pedersen O, Walker M, Pfeiffer AF, Spranger J, Stumvoll M, Meigs JB, Wareham NJ, Kuusisto J, Laakso M, Langenberg C, Dupuis J, Watanabe RM, Florez JC, Ingelsson E, McCarthy MI, Prokopenko I; on behalf of the MAGIC investigators.
  Diabetes. 2013 Dec 2. [Epub ahead of print]
68. More Than a Billion People Taking Statins?: Potential Implications of the New Cardiovascular Guidelines.
  Ioannidis JP.
  JAMA. 2013 Dec 2. [Epub ahead of print] No abstract available.
69. Raw data from clinical trials: within reach?
  Doshi P, Goodman SN, Ioannidis JP.
  Trends Pharmacol Sci. 2013 Dec;34(12):645-7.
70. Comparative transcriptional and functional profiling defines conserved programs of intestinal DC differentiation in humans and mice.
  Watchmaker PB, Lahl K, Lee M, Baumjohann D, Morton J, Kim SJ, Zeng R, Dent A, Ansel KM, Diamond B, Hadeiba H, Butcher EC.
  Nat Immunol. 2014 Jan;15(1):98-108. Epub 2013 Dec 1.
72. The 2013 International Society for Heart and Lung Transplantation Working Formulation for the standardization of nomenclature in the pathologic diagnosis of antibody-mediated rejection in heart transplantation.
  Berry GJ, Burke MM, Andersen C, Bruneval P, Fedrigo M, Fishbein MC, Goddard M, Hammond EH, Leone O, Marboe C, Miller D, Neil D, Rassl D, Revelo MP, Rice A, Rene Rodriguez E, Stewart S, Tan CD, Winters GL, West L, Mehra MR, Angelini A.
  J Heart Lung Transplant. 2013 Dec;32(12):1147-62. 
73. Putting the fat and water protons to work for you: a demonstration through clinical cases of how fat-water separation techniques can benefit your body MRI practice.
  Rampton JW, Young PM, Fidler JL, Hartman RP, Herfkens RJ.
  AJR Am J Roentgenol. 2013 Dec;201(6):1303-8. 
74. Reply to DN Polesel et al.
  Liu A, Reaven GM, Abbasi F.
  Am J Clin Nutr. 2013 Dec;98(6):1593. No abstract available.
75. Network medicine in disease analysis and therapeutics.
  Chen B, Butte AJ.
  Clin Pharmacol Ther. 2013 Dec;94(6):627-9. 
76. STAT3 Targets Suggest Mechanisms of Aggressive Tumorigenesis in Diffuse Large B-Cell Lymphoma.
  Hardee J, Ouyang Z, Zhang Y, Kundaje A, Lacroute P, Snyder M.
  G3 (Bethesda). 2013 Dec 9;3(12):2173-85. 
77. Geometry of the randomized evidence for treatments of pulmonary hypertension.
  Tonelli AR, Zein J, Ioannidis JP.
  Cardiovasc Ther. 2013 Dec;31(6):e138-46. 
78. PharmGKB summary: very important pharmacogene information for cytochrome P450, family 2, subfamily C, polypeptide 8.
  Aquilante CL, Niemi M, Gong L, Altman RB, Klein TE.
  Pharmacogenet Genomics. 2013 Dec;23(12):721-8. No abstract available.
79. The impact of race and higher socioeconomic status on cardiorespiratory fitness.
  Howard EN, Frierson GM, Willis BL, Haskell WL, Powell-Wiley TM, Defina LF.
  Med Sci Sports Exerc. 2013 Dec;45(12):2286-91. 
80. Elevated prefrontal myo-inositol and choline following breast cancer chemotherapy.
  Kesler SR, Watson C, Koovakkattu D, Lee C, O'Hara R, Mahaffey ML, Wefel JS.
  Brain Imaging Behav. 2013 Dec;7(4):501-10.