CVI Member Publications

December 2011

CVI members (indicated in red) had 62 publications in December 2011:

1. Sensory pain qualities in neuropathic pain.
  Mackey S, Carroll I, Emir B, Murphy TK, Whalen E, Dumenci L.
  J Pain. 2012 Jan;13(1):58-63. Epub 2011 Dec 15.
  PMID: 22172451 [PubMed - in process]
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2. Thrombomodulin Links Coagulation to Inflammation and Immunity.
  Morser J.
  Curr Drug Targets. 2011 Dec 29. [Epub ahead of print]
  PMID: 22206250 [PubMed - as supplied by publisher]
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3. Abrupt bradycardia and grouped beating during treadmill testing: a mimic of upper rate behavior.
  Woods CE, Friday K, Wang P, Turakhia MP.
  Heart Rhythm. 2011 Dec 29. [Epub ahead of print]
  PMID: 22209946 [PubMed - as supplied by publisher]
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4. Model for the correction of motion-induced phase errors in multishot diffusion-weighted-MRI of the head: Are cardiac-motion-induced phase errors reproducible from beat-to-beat?
  O'Halloran RL, Holdsworth S, Aksoy M, Bammer R.
  Magn Reson Med. 2011 Dec 28. doi: 10.1002/mrm.23245. [Epub ahead of print]
  PMID: 22213138 [PubMed - as supplied by publisher]
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5. A Two-Dimensional ERK-AKT Signaling Code for an NGF-Triggered Cell-Fate Decision.
  Chen JY, Lin JR, Cimprich KA, Meyer T.
  Mol Cell. 2011 Dec 28. [Epub ahead of print]
  PMID: 22206868 [PubMed - as supplied by publisher]
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6. Pharmacokinetically Stabilized Cystine Knot Peptides that Bind Alpha-v-Beta-6 Integrin with Single-Digit Nanomolar Affinities for Detection of Pancreatic Cancer.
  Kimura RH, Teed R, Hackel BJ, Pysz M, Chuang C, Sathirachinda A, Willmann JK, Gambhir SS.
  Clin Cancer Res. 2011 Dec 27. [Epub ahead of print]
  PMID: 22173551 [PubMed - as supplied by publisher]
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7. Lack of Significant Interactions Between Clopidogrel and Proton Pump Inhibitor Therapy: Meta-Analysis of Existing Literature.
  Gerson LB, McMahon D, Olkin I, Stave C, Rockson SG.
  Dig Dis Sci. 2011 Dec 25. [Epub ahead of print]
  PMID: 22198703 [PubMed - as supplied by publisher]
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8. Comprehensive qPCR profiling of gene expression in single neuronal cells.
  Citri A, Pang ZP, Südhof TC, Wernig M, Malenka RC.
  Nat Protoc. 2011 Dec 22;7(1):118-27. doi: 10.1038/nprot.2011.430.
  PMID: 22193304 [PubMed - in process]
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9. Cost-effectiveness of pharmacologic and invasive therapies for stroke prophylaxis in atrial fibrillation.
  Solomon MD, Ullal AJ, Hoang DD, Freeman JV, Heidenreich P, Turakhia MP.
  J Cardiovasc Med (Hagerstown). 2011 Dec 21. [Epub ahead of print]
  PMID: 22193838 [PubMed - as supplied by publisher]
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10. Catheter ablation of atrial fibrillation: state-of-the-art techniques and future perspectives.
  Santangeli P, Di Biase L, Burkhardt DJ, Horton R, Sanchez J, Bai R, Pump A, Perez M, Wang PJ, Natale A, Al-Ahmad A.
  J Cardiovasc Med (Hagerstown). 2011 Dec 21. [Epub ahead of print]
  PMID: 22193837 [PubMed - as supplied by publisher]
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11. Theranostic effect of serial manganese-enhanced magnetic resonance imaging of human embryonic stem cell derived teratoma.
  Chung J, Dash R, Kee K, Barral JK, Kosuge H, Robbins RC, Nishimura D, Reijo-Pera RA, Yang PC.
  Magn Reson Med. 2011 Dec 21. doi: 10.1002/mrm.23262. [Epub ahead of print]
  PMID: 22190225 [PubMed - as supplied by publisher]
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12. Simple method for MR gradient system characterization and k-space trajectory estimation.
  Addy NO, Wu HH, Nishimura DG.
  Magn Reson Med. 2011 Dec 21. doi: 10.1002/mrm.23217. [Epub ahead of print]
  PMID: 22189904 [PubMed - as supplied by publisher]
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13. The intestinal stem cell markers Bmi1 and Lgr5 identify two functionally distinct populations.
  Yan KS, Chia LA, Li X, Ootani A, Su J, Lee JY, Su N, Luo Y, Heilshorn SC, Amieva MR, Sangiorgi E, Capecchi MR, Kuo CJ.
  Proc Natl Acad Sci U S A. 2011 Dec 21. [Epub ahead of print]
  PMID: 22190486 [PubMed - as supplied by publisher] Free Article
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14. What Caused Excess Strokes in Patients Randomized to Darbepoetin in the Trial to Reduce Cardiovascular Events With Aranesp Therapy (TREAT)?: No Smoking Gun.
  Winkelmayer WC.
  Circulation. 2011 Dec 20;124(25):2805-8. No abstract available.
  PMID: 22184042 [PubMed - in process]
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15. The RootChip: An Integrated Microfluidic Chip for Plant Science.
  Grossmann G, Guo WJ, Ehrhardt DW, Frommer WB, Sit RV, Quake SR, Meier M.
  Plant Cell. 2011 Dec 20. [Epub ahead of print]
  PMID: 22186371 [PubMed - as supplied by publisher] Free Article
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16. Improving Viability of Stem Cells During Syringe Needle Flow Through the Design of Hydrogel Cell Carriers.
  Aguado BA, Mulyasasmita W, Su J, Lampe KJ, Heilshorn SC.
  Tissue Eng Part A. 2011 Dec 20. [Epub ahead of print]
  PMID: 22011213 [PubMed - as supplied by publisher]
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17. Performance comparison of whole-genome sequencing platforms.
  Lam HY, Clark MJ, Chen R, Chen R, Natsoulis G, O'Huallachain M, Dewey FE, Habegger L, Ashley EA, Gerstein MB, Butte AJ, Ji HP, Snyder M.
  Nat Biotechnol. 2011 Dec 18. doi: 10.1038/nbt.2065. [Epub ahead of print]
  PMID: 22178993 [PubMed - as supplied by publisher]
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18. Prevalence of atrial fibrillation and warfarin use in older patients receiving hemodialysis.
  Winkelmayer WC, Liu J, Patrick AR, Setoguchi S, Choudhry NK.
  J Nephrol. 2011 Dec 16:0. doi: 10.5301/jn.5000010. [Epub ahead of print]
  PMID: 22180223 [PubMed - as supplied by publisher]
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19. Skeletogenic phenotype of human Marfan embryonic stem cells faithfully phenocopied by patient-specific induced-pluripotent stem cells.
  Quarto N, Leonard B, Li S, Marchand M, Anderson E, Behr B, Francke U, Reijo-Pera R, Chiao E, Longaker MT.
  Proc Natl Acad Sci U S A. 2011 Dec 16. [Epub ahead of print]
  PMID: 22178754 [PubMed - as supplied by publisher]
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20. Interactions between NKT cells and Tregs are required for tolerance to combined bone marrow and organ transplants.
  Hongo D, Tang X, Dutt S, Nador RG, Strober S.
  Blood. 2011 Dec 15. [Epub ahead of print]
  PMID: 22174155 [PubMed - as supplied by publisher]
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21. Microfluidic capture and release of bacteria in a conical nanopore array.
  Guo P, Hall EW, Schirhagl R, Mukaibo H, Martin CR, Zare RN.
  Lab Chip. 2011 Dec 14. [Epub ahead of print]
  PMID: 22170441 [PubMed - as supplied by publisher]
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22. Esophageal tolerance to high-dose stereotactic ablative radiotherapy.
  Abelson JA, Murphy JD, Loo BW Jr, Chang DT, Daly ME, Wiegner EA, Hancock S, Chang SD, Le QT, Soltys SG, Gibbs IC.
  Dis Esophagus. 2011 Dec 13. doi: 10.1111/j.1442-2050.2011.01295.x. [Epub ahead of print]
  PMID: 22168251 [PubMed - as supplied by publisher]
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23. Catheter-directed thrombolysis for acute DVT.
  Hofmann LV, Kuo WT.
  Lancet. 2011 Dec 13. [Epub ahead of print] No abstract available.
  PMID: 22172245 [PubMed - as supplied by publisher]
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24. Measuring brain oxygenation in humans using a multiparametric quantitative blood oxygenation level dependent MRI approach.
  Christen T, Schmiedeskamp H, Straka M, Bammer R, Zaharchuk G.
  Magn Reson Med. 2011 Dec 12. doi: 10.1002/mrm.23283. [Epub ahead of print]
  PMID: 22162074 [PubMed - as supplied by publisher]
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25. Divergent RNA-Binding Proteins, DAZL and VASA, Induce Meiotic Progression in Human Germ Cells Derived In vitro.
  Medrano JV, Ramathal C, Nguyen HN, Simon C, Reijo-Pera RA.
  Stem Cells. 2011 Dec 12. doi: 10.1002/stem.1012. [Epub ahead of print]
  PMID: 22162380 [PubMed - as supplied by publisher]
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26. Focal adhesion kinase links mechanical force to skin fibrosis via inflammatory signaling.
  Wong VW, Rustad KC, Akaishi S, Sorkin M, Glotzbach JP, Januszyk M, Nelson ER, Levi K, Paterno J, Vial IN, Kuang AA, Longaker MT, Gurtner GC.
  Nat Med. 2011 Dec 11. doi: 10.1038/nm.2574. [Epub ahead of print]
  PMID: 22157678 [PubMed - as supplied by publisher]
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27. The STARD9/Kif16a Kinesin Associates with Mitotic Microtubules and Regulates Spindle Pole Assembly.
  Torres JZ, Summers MK, Peterson D, Brauer MJ, Lee J, Senese S, Gholkar AA, Lo YC, Lei X, Jung K, Anderson DC, Davis DP, Belmont L, Jackson PK.
  Cell. 2011 Dec 9;147(6):1309-23.
  PMID: 22153075 [PubMed - in process]
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28. Programmed cell removal: a new obstacle in the road to developing cancer.
  Chao MP, Majeti R, Weissman IL.
  Nat Rev Cancer. 2011 Dec 8;12(1):58-67. doi: 10.1038/nrc3171.
  PMID: 22158022 [PubMed - in process]
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29. End-Stage Renal Disease and Cardiomyopathy in Children: Cardiac Effects of Renal Transplantation.
  Lal AK, de Biasi AR, Alexander S, Rosenthal DN, Sutherland SM.
  Transplantation. 2011 Dec 5. [Epub ahead of print]
  PMID: 22146314 [PubMed - as supplied by publisher]
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30. Reversible cell-cycle entry in adult kidney podocytes through regulated control of telomerase and Wnt signaling.
  Shkreli M, Sarin KY, Pech MF, Papeta N, Chang W, Brockman SA, Cheung P, Lee E, Kuhnert F, Olson JL, Kuo CJ, Gharavi AG, D'Agati VD, Artandi SE.
  Nat Med. 2011 Dec 4. doi: 10.1038/nm.2550. [Epub ahead of print]
  PMID: 22138751 [PubMed - as supplied by publisher]
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31. Induced neuronal cells: how to make and define a neuron.
  Yang N, Ng YH, Pang ZP, Südhof TC, Wernig M.
  Cell Stem Cell. 2011 Dec 2;9(6):517-25.
  PMID: 22136927 [PubMed - in process]
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32. Vascular Surgery Patients Prescribed Preoperative β-Blockers Experienced a Decrease in the Maximal Heart Rate Observed During Induction of General Anesthesia.
  Mudumbai SC, Wagner T, Mahajan S, King R, Heidenreich PA, Hlatky M, Wallace A, Mariano ER.
  J Cardiothorac Vasc Anesth. 2011 Dec 2. [Epub ahead of print]
  PMID: 22138312 [PubMed - as supplied by publisher]
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33. Improving validation practices in "omics" research.
  Ioannidis JP, Khoury MJ.
  Science. 2011 Dec 2;334(6060):1230-2.
  PMID: 22144616 [PubMed - in process]
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34. Common iliac vein stenosis: a risk factor for oral contraceptive-induced deep vein thrombosis.
  Chan KT, Tye GA, Popat RA, Kuo WT, Unver K, Kothary N, Sze DY, Hofmann LV.
  Am J Obstet Gynecol. 2011 Dec;205(6):537.e1-6. Epub 2011 Jul 13.
  PMID: 21893308 [PubMed - in process]
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35. Invited commentary.
  Shrager JB.
  Ann Thorac Surg. 2011 Dec;92(6):2005-6. No abstract available.
  PMID: 22115210 [PubMed - in process]
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36. Rapid Response Team Implementation in a Children's Hospital.
  Sharek PJ, Parast LM, Roth SJ.
  Arch Pediatr Adolesc Med. 2011 Dec;165(12):1139. No abstract available.
  PMID: 22147784 [PubMed - in process]
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37. From pharmacogenomic knowledge acquisition to clinical applications: the PharmGKB as a clinical pharmacogenomic biomarker resource.
  McDonagh EM, Whirl-Carrillo M, Garten Y, Altman RB, Klein TE.
  Biomark Med. 2011 Dec;5(6):795-806.
  PMID: 22103613 [PubMed - in process]
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38. Endothelial progenitor cells in cardiovascular disease and chronic inflammation: from biomarker to therapeutic agent.
  Grisar JC, Haddad F, Gomari FA, Wu JC.
  Biomark Med. 2011 Dec;5(6):731-44.
  PMID: 22103609 [PubMed - in process]
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39. Computational modeling of growth: systemic and pulmonary hypertension in the heart.
  Rausch MK, Dam A, Göktepe S, Abilez OJ, Kuhl E.
  Biomech Model Mechanobiol. 2011 Dec;10(6):799-811. Epub 2010 Dec 25.
  PMID: 21188611 [PubMed - in process]
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40. Is a myocardial infarction more likely to result from a mild coronary lesion or an ischemia-producing one?
  Fearon WF.
  Circ Cardiovasc Interv. 2011 Dec 1;4(6):539-41. No abstract available.
  PMID: 22186104 [PubMed - in process]
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41. Profiling of autoantibodies in IgA nephropathy, an integrative antibiomics approach.
  Sigdel TK, Woo SH, Dai H, Khatri P, Li L, Myers B, Sarwal MM, Lafayette RA.
  Clin J Am Soc Nephrol. 2011 Dec;6(12):2775-84.
  PMID: 22157707 [PubMed - in process]
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42. Seeing elegance in gene regulatory networks of the worm.
  Van Nostrand EL, Kim SK.
  Curr Opin Genet Dev. 2011 Dec;21(6):776-86. Epub 2011 Sep 29.
  PMID: 21963133 [PubMed - in process]
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43. Mechanical force prolongs acute inflammation via T-cell-dependent pathways during scar formation.
  Wong VW, Paterno J, Sorkin M, Glotzbach JP, Levi K, Januszyk M, Rustad KC, Longaker MT, Gurtner GC.
  FASEB J. 2011 Dec;25(12):4498-510. Epub 2011 Sep 12.
  PMID: 21911593 [PubMed - in process]
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44. Automated tracing of the adventitial contour of aortoiliac and peripheral arterial walls in CT angiography (CTA) to allow calculation of non-calcified plaque burden.
  Raman B, Raman R, Rubin GD, Napel S.
  J Digit Imaging. 2011 Dec;24(6):1078-86.
  PMID: 21547519 [PubMed - in process]
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45. Interleukin-16 deficiency suppresses the development of chronic rejection in murine cardiac transplantation model.
  Kimura N, Itoh S, Nakae S, Axtell RC, Velotta JB, Bos EJ, Merk DR, Gong Y, Okamura H, Nagamine CM, Adachi H, Kornfeld H, Robbins RC, Fischbein MP.
  J Heart Lung Transplant. 2011 Dec;30(12):1409-17.
  PMID: 22055099 [PubMed - in process]
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46. Three-Dimensional Microstructural Changes in Murine Abdominal Aortic Aneurysms Quantified Using Immunofluorescent Array Tomography.
  Saatchi S, Azuma J, Wanchoo N, Smith SJ, Yock PG, Taylor CA, Tsao PS.
  J Histochem Cytochem. 2011 Dec 1. [Epub ahead of print] No abstract available.
  PMID: 22140132 [PubMed - as supplied by publisher] Free Article
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47. Low- and high-dose plant and marine (n-3) fatty acids do not affect plasma inflammatory markers in adults with metabolic syndrome.
  Dewell A, Marvasti FF, Harris WS, Tsao P, Gardner CD.
  J Nutr. 2011 Dec;141(12):2166-71. Epub 2011 Oct 26.
  PMID: 22031659 [PubMed - in process]
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48. Early results of a highly selective algorithm for surgery on patients with neurogenic thoracic outlet syndrome.
  Chandra V, Olcott C 4th, Lee JT.
  J Vasc Surg. 2011 Dec;54(6):1698-705. Epub 2011 Jul 31.
  PMID: 21803527 [PubMed - in process]
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49. Coil embolization of a left circumflex feeder branch in a patient with a mediastinal paraganglioma.
  Ho MY, Fleischmann D, Forrester MD, Lee DP.
  JACC Cardiovasc Interv. 2011 Dec;4(12):1345-6. No abstract available.
  PMID: 22192376 [PubMed - in process]
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50. Response to Tonsaker et al.
  Kim SK, Budovskaya YV, Johnson TE.
  Mech Ageing Dev. 2011 Dec 1. [Epub ahead of print] No abstract available.
  PMID: 22155122 [PubMed - as supplied by publisher]
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51. Fully 3D list-mode time-of-flight PET image reconstruction on GPUs using CUDA.
  Cui JY, Pratx G, Prevrhal S, Levin CS.
  Med Phys. 2011 Dec;38(12):6775.
  PMID: 22149859 [PubMed - in process]
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53. Non-invasive bioluminescence imaging of myoblast-mediated hypoxia-inducible factor-1 alpha gene transfer.
  Gheysens O, Chen IY, Rodriguez-Porcel M, Chan C, Rasooly J, Vaerenberg C, Paulmurugan R, Willmann JK, Deroose C, Wu J, Gambhir SS.
  Mol Imaging Biol. 2011 Dec;13(6):1124-32.
  PMID: 21267661 [PubMed - in process]
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54. In vivo bioluminescence imaging of inducible nitric oxide synthase gene expression in vascular inflammation.
  Terashima M, Ehara S, Yang E, Kosuge H, Tsao PS, Quertermous T, Contag CH, McConnell MV.
  Mol Imaging Biol. 2011 Dec;13(6):1061-6.
  PMID: 21057879 [PubMed - in process]
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55. Combined respiratory and cardiac triggering improves blood pool contrast-enhanced pediatric cardiovascular MRI.
  Vasanawala SS, Chan FP, Newman B, Alley MT.
  Pediatr Radiol. 2011 Dec;41(12):1536-44. Epub 2011 Jul 24.
  PMID: 21786125 [PubMed - in process]
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56. PharmGKB summary: carbamazepine pathway.
  Thorn CF, Leckband SG, Kelsoe J, Leeder JS, Müller DJ, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2011 Dec;21(12):906-10. No abstract available.
  PMID: 21738081 [PubMed - in process]
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57. Correlation between metabolic tumor volume and pathologic tumor volume in squamous cell carcinoma of the oral cavity.
  Murphy JD, Chisholm KM, Daly ME, Wiegner EA, Truong D, Iagaru A, Maxim PG, Loo BW Jr, Graves EE, Kaplan MJ, Kong C, Le QT.
  Radiother Oncol. 2011 Dec;101(3):356-61. Epub 2011 Jun 12.
  PMID: 21665308 [PubMed - in process]
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58. Nonintegrating knockdown and customized scaffold design enhances human adipose-derived stem cells in skeletal repair.
  Levi B, Hyun JS, Nelson ER, Li S, Montoro DT, Wan DC, Jia FJ, Glotzbach JC, James AW, Lee M, Huang M, Quarto N, Gurtner GC, Wu JC, Longaker MT.
  Stem Cells. 2011 Dec;29(12):2018-29. doi: 10.1002/stem.757.
  PMID: 21997852 [PubMed - in process]
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59. MC3T3-E1 Osteoprogenitor Cells Migrate Systemically to a Bone Defect and Enhance Bone Healing.
  Gibon E, Batke B, Jawad MU, Fritton K, Rao A, Yao Z, Biswal S, Gambhir S, Goodman SB.
  Tissue Eng Part A. 2011 Dec 1. [Epub ahead of print]
  PMID: 22129134 [PubMed - as supplied by publisher]
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60. A Novel Cardioprotective Agent in Cardiac Transplantation: Metformin Activation of AMP-Activated Protein Kinase Decreases Acute Ischemia-Reperfusion Injury and Chronic Rejection.
  Chin JT, Troke JJ, Kimura N, Itoh S, Wang X, Palmer OP, Robbins RC, Fischbein MP.
  Yale J Biol Med. 2011 Dec;84(4):423-32.
  PMID: 22180679 [PubMed - in process] Free PMC Article
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61. Publication Delay of Randomized Trials on 2009 Influenza A (H1N1) Vaccination.
  Ioannidis JP, Manzoli L, De Vito C, D'Addario M, Villari P.
  PLoS One. 2011;6(12):e28346. Epub 2011 Dec 2.
  PMID: 22164274 [PubMed - in process] Free PMC Article
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62. PET Imaging of Integrin Positive Tumors Using F Labeled Knottin Peptides.
  Liu S, Liu H, Ren G, Kimura RH, Cochran JR, Cheng Z.
  Theranostics. 2011;1:403-12. Epub 2011 Dec 21.
  PMID: 22211146 [PubMed - in process] Free PMC Article
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