Bio

Professional Education


  • Doctor of Philosophy, University of California Los Angeles (2014)
  • Bachelor of Science, Central South University (2009)

Stanford Advisors


Publications

All Publications


  • Poly(A) Signal-Dependent Transcription Termination Occurs through a Conformational Change Mechanism that Does Not Require Cleavage at the Poly(A) Site MOLECULAR CELL Zhang, H., Rigo, F., Martinson, H. G. 2015; 59 (3): 437-448

    Abstract

    Transcription termination for genes encoding polyadenylated mRNAs requires a functional poly(A) signal (PAS) in the nascent pre-mRNA. Often called PAS-dependent termination, or PADT, it is widely assumed that the PAS requirement reflects an obligatory poly(A) site cleavage requirement for termination. Cleavage is thought to provide entry for a 5'-to-3' exonuclease that targets RNA polymerase II via the nascent transcript-i.e., the torpedo model. To assess the role of cleavage in PADT, we developed a PADT assay using HeLa nuclear extract. Here we examine the basal mechanism of PADT and show that cleavage at the poly(A) site is not required for PADT. Isolated elongation complexes undergo termination in a PAS-dependent manner when incubated in buffer, in the absence of extract, nucleotides, or cleavage at the poly(A) site. Thus, PADT-proficient complexes undergo a conformational change that triggers termination. PADT is inhibited by α-amanitin, which presumably blocks the required conformational change.

    View details for DOI 10.1016/j.molcel.2015.06.008

    View details for Web of Science ID 000362457600010

    View details for PubMedID 26166703