SCAN-ACT: adoptive T cell therapy target discovery through single-cell transcriptomics
Testa S, Pal A, Subramanian A, Varma S, Tang JP, Graham D, Arfan S, Pan M, Bui NQ, Ganjoo KN, Dry S, Huang P, van de Rijn M, Jiang W, Kalbasi A, Moding EJ. Genome Med. 2025 Aug 14;17(1):89.
Integrating ctDNA Analysis and Radiomics for Dynamic Risk Assessment in Localized Lung Cancer
Moding EJ, Shahrokh Esfahani M, Jin C, Hui AB, Nabet BY, Liu Y, Chabon JJ, Binkley MS, Kurtz DM, Hamilton EG, Chaudhuri AA, Liu CL, Li Z, Bonilla RF, Jiang AL, Lau BC, Lopez P, He J, Qiao Y, Xu T, Yao L, Gandhi S, Liao Z, Das M, Ramchandran KJ, Padda SK, Neal JW, Wakelee HA, Gensheimer MF, Loo BW Jr, Li R, Lin SH, Alizadeh AA, Diehn M. Cancer Discov. 2025 Aug 4;15(8):1609-1629.
Evolutionary Pressures Shape Undifferentiated Pleomorphic Sarcoma Development and Radiotherapy Response
Blomain ES, Soudi S, Wang Z, Somani A, Subramanian A, Nouth SCL, Oladipo E, New C, Kenney DE, Nemat-Gorgani N, Kindler T, Avedian RS, Steffner RJ, Mohler DG, Hiniker SM, Chin AL, Kalbasi A, Binkley MS, Fried M, Gaida MM, van de Rijn M, Moding EJ. Cancer Res. 2025 Mar 14;85(6):1162-1174.
Sarcoma microenvironment cell states and ecosystems are associated with prognosis and predict response to immunotherapy
Subramanian A, Nemat-Gorgani N, Ellis-Caleo TJ, van IJzendoorn DGP, Sears TJ, Somani A, Luca BA, Zhou MY, Bradic M, Torres IA, Oladipo E, New C, Kenney DE, Avedian RS, Steffner RJ, Binkley MS, Mohler DG, Tap WD, D'Angelo SP, van de Rijn M, Ganjoo KN, Bui NQ, Charville GW, Newman AM, Moding EJ. Nat Cancer. 2024 Apr;5(4):642-658.
Monitoring Sarcoma Response to Immune Checkpoint Inhibition and Local Cryotherapy with Circulating Tumor DNA Analysis
Bui NQ, Nemat-Gorgani N, Subramanian A, Torres IA, Lohman M, Sears TJ, van de Rijn M, Charville GW, Becker HC, Wang DS, Hwang GL, Ganjoo KN, Moding EJ. Clin Cancer Res. 2023 Jul 14;29(14):2612-2620.
Circulating Tumor DNA Dynamics Predict Benefit from Consolidation Immunotherapy in Locally Advanced Non-Small Cell Lung Cancer
Moding EJ, Nabet BY, Alizadeh AA, Diehn M. Cancer Discov. 2021 Dec 1;11(12):2968-2986.Moding EJ, Liu Y, Nabet BY, Chabon JJ, Chaudhuri AA, Hui AB, Bonilla RF, Ko RB, Yoo CH, Gojenola L, Jones CD, He J, Qiao Y, Xu T, Heymach JV, Tsao A, Liao Z, Gomez DR, Das M, Padda SK, Ramchandran KJ, Neal JW, Wakelee HA, Loo BW Jr, Lin SH, Alizadeh AA, Diehn M. Nat Cancer. 2020 Feb;1(2):176-183.
