- Repetitive schistosoma exposure causes perivascular lung fibrosis and persistent pulmonary hypertension. Kumar R, Lee MH, Kassa B, Fonseca Balladares DC, Mickael C, Sanders L, Andruska A, Kumar M, Spiekerkoetter E, Bandeira A, Stenmark KR, Tuder RM, Graham BB.Clin Sci (Lond). 2023 Apr 26;137(8):617-631. doi: 10.1042/CS20220642.PMID: 37014925 -->Link to Publication<--
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- von Willebrand Factor Is Produced Exclusively by Endothelium, Not Neointima, in Occlusive Vascular Lesions in Both Pulmonary Hypertension and Atherosclerosis. Steffes LC, Cheng P, Quertermous T, Kumar ME.Circulation. 2022 Aug 2;146(5):429-431. doi: 10.1161/CIRCULATIONAHA.121.058427. Epub 2022 Aug 1.PMID: 35914017 -->Link to Publication<--
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- The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans. Tabula Sapiens Consortium*; Jones, R. C., Karkanias, J., Krasnow, M. A., Pisco, A. O., Quake, S. R., Salzman, J., Yosef, N., Bulthaup, B., Brown, P., Harper, W., Hemenez, M., Ponnusamy, R., Salehi, A., Sanagavarapu, B. A., Spallino, E., Aaron, K. A., Concepcion, W., Gardner, J. M., Kelly, B., Neidlinger, N., Wang, Z., Crasta, S., Kolluru, S., Morri, M., Pisco, A. O., Tan, S. Y., Travaglini, K. J., Xu, C., Alcántara-Hernández, M., Almanzar, N., Antony, J., Beyersdorf, B., Burhan, D., Calcuttawala, K., Carter, M. M., Chan, C. K., Chang, C. A., Chang, S., Colville, A., Crasta, S., Culver, R. N., Cvijović, I., D'Amato, G., Ezran, C., Galdos, F. X., Gillich, A., Goodyer, W. R., Hang, Y., Hayashi, A., Houshdaran, S., Huang, X., Irwin, J. C., Jang, S., Juanico, J. V., Kershner, A. M., Kim, S., Kiss, B., Kolluru, S., Kong, W., Kumar, M. E., Kuo, A. H., Leylek, R., Li, B., Loeb, G. B., Lu, W. J., Mantri, S., Markovic, M., McAlpine, P. L., de Morree, A., Morri, M., Mrouj, K., Mukherjee, S., Muser, T., Neuhöfer, P., Nguyen, T. D., Perez, K., Phansalkar, R., Pisco, A. O., Puluca, N., Qi, Z., Rao, P., Raquer-McKay, H., Schaum, N., Scott, B., Seddighzadeh, B., Segal, J., Sen, S., Sikandar, S., Spencer, S. P., Steffes, L. C., Subramaniam, V. R., Swarup, A., Swift, M., Travaglini, K. J., Van Treuren, W., Trimm, E., Veizades, S., Vijayakumar, S., Vo, K. C., Vorperian, S. K., Wang, W., Weinstein, H. N., Winkler, J., Wu, T. T., Xie, J., Yung, A. R., Zhang, Y., Detweiler, A. M., Mekonen, H., Neff, N. F., Sit, R. V., Tan, M., Yan, J., Bean, G. R., Charu, V., Forgó, E., Martin, B. A., Ozawa, M. G., Silva, O., Tan, S. Y., Toland, A., Vemuri, V. N., Afik, S., Awayan, K., Botvinnik, O. B., Byrne, A., Chen, M., Dehghannasiri, R., Detweiler, A. M., Gayoso, A., Granados, A. A., Li, Q., Mahmoudabadi, G., McGeever, A., de Morree, A., Olivieri, J. E., Park, M., Pisco, A. O., Ravikumar, N., Salzman, J., Stanley, G., Swift, M., Tan, M., Tan, W., Tarashansky, A. J., Vanheusden, R., Vorperian, S. K., Wang, P., Wang, S., Xing, G., Xu, C., Yosef, N., Alcántara-Hernández, M., Antony, J., Chan, C. K., Chang, C. A., Colville, A., Crasta, S., Culver, R., Dethlefsen, L., Ezran, C., Gillich, A., Hang, Y., Ho, P. Y., Irwin, J. C., Jang, S., Kershner, A. M., Kong, W., Kumar, M. E., Kuo, A. H., Leylek, R., Liu, S., Loeb, G. B., Lu, W. J., Maltzman, J. S., Metzger, R. J., de Morree, A., Neuhöfer, P., Perez, K., Phansalkar, R., Qi, Z., Rao, P., Raquer-McKay, H., Sasagawa, K., Scott, B., Sinha, R., Song, H., Spencer, S. P., Swarup, A., Swift, M., Travaglini, K. J., Trimm, E., Veizades, S., Vijayakumar, S., Wang, B., Wang, W., Winkler, J., Xie, J., Yung, A. R., Artandi, S. E., Beachy, P. A., Clarke, M. F., Giudice, L. C., Huang, F. W., Huang, K. C., Idoyaga, J., Kim, S. K., Krasnow, M., Kuo, C. S., Nguyen, P., Quake, S. R., Rando, T. A., Red-Horse, K., Reiter, J., Relman, D. A., Sonnenburg, J. L., Wang, B., Wu, A., Wu, S. M., Wyss-Coray, T. .Science. 2022 May 13;376(6594):eabl4896. doi: 10.1126/science.abl4896. Epub 2022 May 13.PMID: 35549404 -->Link to Publication<--
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- Shunt-type plexiform lesions identified in the Sugen5416/hypoxia rat model of pulmonary arterial hypertension using synchrotron-based phase-contrast micro-CT. van der Have O, Westöö C, Ahrné F, Tian X, Ichimura K, Dreier T, Norvik C, Kumar ME, Spiekerkoetter E, Tran-Lundmark K.Eur Respir J. 2022 Jun 9;59(6):2102802. doi: 10.1183/13993003.02802-2021. Print 2022 Jun.PMID: 35332070 -->Link to Publication<--
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- Molecular hallmarks of heterochronic parabiosis at single-cell resolution. Pálovics R, Keller A, Schaum N, Tan W, Fehlmann T, Borja M, Kern F, Bonanno L, Calcuttawala K, Webber J, McGeever A; Tabula Muris Consortium; Luo J, Pisco AO, Karkanias J, Neff NF, Darmanis S, Quake SR, Wyss-Coray T.Nature. 2022 Mar;603(7900):309-314. doi: 10.1038/s41586-022-04461-2. Epub 2022 Mar 2.PMID: 35236985 -->Link to Publication<--
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- Cell types of origin of the cell-free transcriptome. Vorperian SK, Moufarrej MN; Tabula Sapiens Consortium; Quake SR.Nat Biotechnol. 2022 Jun;40(6):855-861. doi: 10.1038/s41587-021-01188-9. Epub 2022 Feb 7.PMID: 35132263 -->Link to Publication<--
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- Chronic Daily House Dust Mite Exposure in Mice is an Effective Model to Quantify the Effect of Pharmacologic Agents on Discrete Stages of Artery Remodeling in Pulmonary Hypertension. Steffes LC, Kumar ME.Bio Protoc. 2022 Jan 5;12(1):e4273. doi: 10.21769/BioProtoc.4273. eCollection 2022 Jan 5.PMID: 35118166 -->Link to Publication<--
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- RNA splicing programs define tissue compartments and cell types at single-cell resolution. Olivieri JE, Dehghannasiri R, Wang PL, Jang S, de Morree A, Tan SY, Ming J, Ruohao Wu A; Tabula Sapiens Consortium; Quake SR, Krasnow MA, Salzman J.Elife. 2021 Sep 13;10:e70692. doi: 10.7554/eLife.70692.PMID: 34515025 -->Link to Publication<--
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- Ageing hallmarks exhibit organ-specific temporal signatures. Schaum N, Lehallier B, Hahn O, Pálovics R, Hosseinzadeh S, Lee SE, Sit R, Lee DP, Losada PM, Zardeneta ME, Fehlmann T, Webber JT, McGeever A, Calcuttawala K, Zhang H, Berdnik D, Mathur V, Tan W, Zee A, Tan M; Tabula Muris Consortium; Pisco AO, Karkanias J, Neff NF, Keller A, Darmanis S, Quake SR, Wyss-Coray T.Nature. 2020 Jul;583(7817):596-602. doi: 10.1038/s41586-020-2499-y. Epub 2020 Jul 15.PMID: 32669715 -->Link to Publication<--
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- A Notch3-Marked Subpopulation of Vascular Smooth Muscle Cells Is the Cell of Origin for Occlusive Pulmonary Vascular Lesions. Steffes LC, Froistad AA, Andruska A, Boehm M, McGlynn M, Zhang F, Zhang W, Hou D, Tian X, Miquerol L, Nadeau K, Metzger RJ, Spiekerkoetter E, Kumar ME.Circulation. 2020 Oct 20;142(16):1545-1561. doi: 10.1161/CIRCULATIONAHA.120.045750. Epub 2020 Aug 14.PMID: 32794408 -->Link to Publication<--
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- A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. Tabula Muris Consortium.Nature. 2020 Jul;583(7817):590-595. doi: 10.1038/s41586-020-2496-1. Epub 2020 Jul 15.PMID: 32669714 -->Link to Publication<--
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- Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Tabula Muris Consortium; Overall coordination; Logistical coordination; Organ collection and processing; Library preparation and sequencing; Computational data analysis; Cell type annotation; Writing group; Supplemental text writing group; Principal investigators.Nature. 2018 Oct;562(7727):367-372. doi: 10.1038/s41586-018-0590-4. Epub 2018 Oct 3.PMID: 30283141 -->Link to Publication<--
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- Transcription factor TBX4 regulates myofibroblast accumulation and lung fibrosis. Xie T, Liang J, Liu N, Huan C, Zhang Y, Liu W, Kumar M, Xiao R, D'Armiento J, Metzger D, Chambon P, Papaioannou VE, Stripp BR, Jiang D, Noble PW.J Clin Invest. 2016 Sep 1;126(9):3626. doi: 10.1172/JCI89968. Epub 2016 Aug 22.PMID: 27548522 -->Link to Publication<--
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- Mesenchymal cells. Defining a mesenchymal progenitor niche at single-cell resolution. Kumar ME, Bogard PE, Espinoza FH, Menke DB, Kingsley DM, Krasnow MA.Science. 2014 Nov 14;346(6211):1258810. doi: 10.1126/science.1258810.PMID: 25395543 -->Link to Publication<--
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- miR-142-3p balances proliferation and differentiation of mesenchymal cells during lung development. Carraro G, Shrestha A, Rostkovius J, Contreras A, Chao CM, El Agha E, Mackenzie B, Dilai S, Guidolin D, Taketo MM, Günther A, Kumar ME, Seeger W, De Langhe S, Barreto G, Bellusci S.Development. 2014 Mar;141(6):1272-81. doi: 10.1242/dev.105908. Epub 2014 Feb 19.PMID: 24553287 -->Link to Publication<--
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- Molecular determinants of lung development. Morrisey EE, Cardoso WV, Lane RH, Rabinovitch M, Abman SH, Ai X, Albertine KH, Bland RD, Chapman HA, Checkley W, Epstein JA, Kintner CR, Kumar M, Minoo P, Mariani TJ, McDonald DM, Mukouyama YS, Prince LS, Reese J, Rossant J, Shi W, Sun X, Werb Z, Whitsett JA, Gail D, Blaisdell CJ, Lin QS.Ann Am Thorac Soc. 2013 Apr;10(2):S12-6. doi: 10.1513/AnnalsATS.201207-036OT.PMID: 23607856 -->Link to Publication<--
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- Radial construction of an arterial wall. Greif DM, Kumar M, Lighthouse JK, Hum J, An A, Ding L, Red-Horse K, Espinoza FH, Olson L, Offermanns S, Krasnow MA.Dev Cell. 2012 Sep 11;23(3):482-93. doi: 10.1016/j.devcel.2012.07.009.PMID: 22975322 -->Link to Publication<--