Datasets
Analysis of Differentiation Protocols Defines a Common Pancreatic Progenitor Molecular Signature and Guides Refinement of Endocrine Differentiation" published at Stem Cell Reports in 2020 More
Original publication: Wesolowska-Andersen et al., Stem Cell Reports. 2020 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962645/
Data is available through the EGA - https://ega-archive.org to request the data please read the data access agreement below and complete the application form. Your application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001003513
Dataset: EGAD00001004823 (RNA-seq)
Dataset: EGAD00001004824 (ATAC-seq)
Data Access Committee: EGAC00001000335
Data access agreement for ATAC-seq
Data access agreement for RNA-seq
Application to access the ATAC-seq data
Application to access the RNA-seq data
INSPIRE consortium More
Original publication: Vinuela et al Nature Communications
2020-https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7528108/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001003997
Dataset: EGAD00001006149
Data Access Committee: EGAC000010001390
Cis-eQTL mapping of human pancreatic islets More
Original publication: van de Bunt et al., PLoS Genetics, 2015 – https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005694
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001001265
Dataset: EGAD00001001601
Data Access Committee: EGAC00001000335
Characterization of a human iPSC-derived endocrine pancreas model More
Original publication: van de Bunt et al., Islets, 2016 – https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987020/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAD00001002148
Dataset: EGAD00001001601
Data Access Committee: EGAC00001000335
Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci - WGBS dataset More
Original publication: Thurner et al Elife 2018 - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5828664/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study:EGAS00001002592
Dataset: EGAD00001003946
Data Access Committee: EGAC00001000335
Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci – ATAC-seq dataset More
Original publication: Thurner et al Elife 2018 - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5828664/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study:EGAS00001002592
Dataset: EGAD00001003947
Data Access Committee: EGAC00001000335
Genes associated with pancreas development and function maintain open chromatin in iPSCs generated from human pancreatic beta cells - RNA dataset More
Original publication: Thurner et al Stem Cell Reports 2017 - https://www-cell-com.stanford.idm.oclc.org/stem-cell-reports/pdf/S2213-6711(17)30427-7.pdf
Data is available through the EGA (link here please - https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study:EGAS00001002591
Dataset: EGAD00001003780
Data Access Committee: EGAC00001000335
Genes associated with pancreas development and function maintain open chromatin in iPSCs generated from human pancreatic beta cells – ATAC-Seq dataset More
Original publication: Thurner et al Stem Cell Reports 2017 - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5831005/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001002591
Dataset: EGAD00001003759
Data Access Committee: EGAC00001000335
Understanding human fetal pancreas development using subpopulation sorting and RNA sequencing More
Original publication: Ramond et al., Development, 2018 https://dev-biologists-org.stanford.idm.oclc.org/content/145/16/dev165480
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001003127
Dataset: EGAD00001004210
Data Access Committee: EGAC00001001039
Characterization of a human iPSC-derived islet differentiation model. More
Original publication: Perez-Alcantara et al., Diabetologia, 2018 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354904/
Data is available through the EGA https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001002721
Dataset: EGAD00001003807
Data Access Committee: EGAC00001000335
RNA-seq profiling of NKX6.1 reporter iPSC lines for isolation and analysis of functionally relevant neuronal and pancreas populations. More
Original publication: Gupta et al., Stem Cell Res. 2018 https://www.sciencedirect.com/science/article/pii/S1873506118301119?via%3Dihub
Data is available through the EGA - https://ega-archive.org to request the data please read the data access agreement below and complete the application form. You application will be considered by the Data Access Committee and when approved EGA will release the data.
Forms should be returned to agloyn@stanford.edu
Study: EGAS00001002802
Dataset: EGAD00001003911
Data Access Committee: EGAC00001000335