Data Studio


We foster dialogue between data scientists and researchers in clinics and laboratories in order to drive excellence in health care research at Stanford.

If you are interested in any of our biomedical data support services, please contact us by completing the Request for DBDS Consultation Services/Collaboration form.

About the Data Studio

The Data Studio is a collaboration between Spectrum (The Stanford Center for Clinical and Translational Research and Education) and the Department of Biomedical Data Science. The Data Studio is open to the Stanford community, and we expect it to have educational value for students and postdocs interested in biomedical data science.

Most sessions are an extensive and in-depth consultation for a Medical School researcher based on research questions, data, statistical models, and other material prepared by the researcher with the aid of our facilitator. During the Data Studio, the researcher explains the project, goals, and needs. Experts in the area across campus will be invited and contribute to the brainstorming. After the meeting, the facilitator will follow up, helping with immediate action items and summary of the discussion. Ultimately, we strive to pair up each PI with a data scientist for long term collaboration.

The last session of each month is devoted to drop-in consulting. BDS faculty are available to provide assistance with your research questions. Bring any data, prior analyses, or other materials that you have. No advance notification is required. Consult the schedule below for the date, time, and location of the drop-in session.

A Data Studio session may also be an informal, interactive presentation by a data scientist on a topic, such as advanced data visualization in R, the statistical properties of convolutional neural networks (CNN), etc.

Schedule

The Data Studio is held each Wednesday 1:30-2:50pm during fall, winter, and spring quarters. Consult the schedule below for the location of each session. Students may register for BIODS 232, but all are welcome to attend.

Currently scheduled topics are listed below, followed by links to topics and summaries from previous quarters. Click here to sign up for our mailing list. 

Date Investigator Project Title

9/25

LKSC 205/206

INVESTIGATOR: Pamela Flood, Professor of Anesthesiology, Perioperative and Pain Medicine (OB)

PRESENTER: Haley Hedlin, Biostatistician, Quantitative Sciences Unit

Prevention of Persistent Opioid use in Mothers

Summary (PDF)

10/2 No studio  

10/9

MSOB X393

INVESTIGATOR: Laurel Crosby, Research Engineer, Stanford Genome Technology Center

Impact of Organic Mercury Exposure on Selenium Bioavailability in Chronic Fatigue Syndrome

Summary (PDF)

10/16

MSOB X393

 

INVESTIGATOR: Alice Fan, Assistant Professor, Medicine-Oncology

PRESENTER: Christian Hoerner, Research Scientist, Canary Center at Stanford for Cancer Early Detection

Platelet Transcriptome for Early Detection of Kidney Cancer

Summary (PDF)

10/23

MSOB X393

INVESTIGATOR: Jessica Ansari, Clinical Assistant Professor, Department of Anesthesiology, Perioperative and Pain Medicine

Calcium Chloride in the Prevention of Uterine Atony during Cesarean

Summary (PDF)

10/30

1:30pm-3:00pm

MSOB 393

Drop in Data Science Consulting

DESCRIPTION: This week, Data Studio features free drop-in consulting for your data science needs. Biomedical Data Science faculty are available to provide assistance with your research questions.

Summary (PDF)

11/6

FIRST SESSION 1:30PM-2:15PM

SECOND SESSION 2:15PM-3:00PM

MSOB X393

FIRST SESSION INVESTIGATOR: Qian Zhao, Doctoral Candidate, Department of Statistics

SECOND SESSION INVESTIGATOR: Valerie Chock, Associate Professor of Neonatology, Department of Pediatrics

FIRST SESSION: Forecasting Platelet Demand to Reduce Inventory Wastage

SECOND: Cerebral Oxygenation and Autoregulation in Preterm Infants

Summary (PDF)

11/13

1:30-3:00pm

MSOB X393

INVESTIGATOR: Angela Lumba-Brown, Clinical Assistant Professor, Departments of Emergency Medicine and Pediatrics

Subtype-based Early Intervention in Pediatric Concussion

Summary (PDF)

11/20

1:30-3:00pm

MSOB X393

INVESTIGATOR: Wei Jiang, Instructor, Division of Human Gene Therapy, Department of Pediatrics

The Role of T-cells in the Autoimmune Etiology of Narcolepsy

Summary (PDF)

12/4 Drop in consulting