Longitudinal alteration of cortical thickness and volume in high-impact sports.

Mills, B., Goubran, M., Parivash, S., Dennis, E., Rezaii, P., Akers, C., Bian, W., Mitchell, L., Boldt, B., Douglas, D., Sami, S., Mouchawar, N., Wilson, E., DiGiacomo, P., Parekh, M., Do, H., Lopez, J., Rosenberg, J., Camarillo, D., Grant, G., Wintermark, M., and Zeineh, M.
Neuroimage, Aug. 2020, 217.
https://doi.org/10.1016/j.neuroimage.2020.116864
PDF

Simultaneous FDG-PET/MRI detects hippocampal subfield metabolic differences in AD/MCI.

Carlson, M., DiGiacomo, P., Fan, A., Goubran, M., Khalighi, M.M., Chao, S., Vasanawala, M., Wintermark, M., Mormino, E., Zaharchuk, G., James, M., and Zeineh, M.
Scientific Reports, July 2020, 10:12064.
https://doi.org/10.1038/s41598-020-69065-0
PDF

A within‐coil optical prospective motion‐correction system for brain imaging at 7T.

DiGiacomo, P., Maclaren, J., Aksoy, M., Tong, E., Carlson, M., Lanzman, B., Hashmi, S., Watkins, R., Rosenberg, J., Burns, B., Skloss, T.W., Rettman, D., Rutt, B., Bammer, R., and Zeineh, M.
Magnetic Resonance in Medicine, Jan. 2020, 1(11).
https://doi.org/10.1002/mrm.28211
PDF

Electrophysiological dynamics of antagonistic brain networks reflect attentional fluctuations.

Kucyi, A., Daitch, A., Raccah, O., Zhao, B., Zhang, C., Esterman, M., Zeineh, M., Halpern, C.H., Zhang, K., Zhang, J., and Parvizi, J.
Nature Communications, Jan. 2020, 11(1).
https://doi.org/10.1038/s41467-019-14166-2
PDF

Hippocampal CA1 subfield predicts episodic memory impairment in Parkinson's disease.

La, C., Linortner, P., Bernstein, J. D., Ua Cruadhlaoich, M. A. I., Fenesy, M., Deutsch, G. K., Rutt, B., Tian, L., Wagner, A.D., Zeineh, M., Kerchner, G., and Poston, K. L.
NeuroImage: Clinical, Dec. 2019, 23
https://doi.org/10.1016/j.nicl.2019.101824
PDF

Multimodal image registration and connectivity analysis for integration of connectomic data from microscopy to MRI.

Goubran, M., Leuze, C., Hsueh, B., Aswendt, M., Ye, L., Tian, Q., Cheng, M. Y., Crow, A., Steinberg, G. K., McNab, J. A., Deisseroth, K., Zeineh, M.
Nature Communications, Dec. 2019, 10: 5504.
https://doi.org/10.1038/s41467-019-13374-0
PDF

Longitudinal changes in hippocampal subfield volumes associated with collegiate football.

Parivash, S. N., Goubran, M., Mills, B. D., Rezaii, P., Thaler, C., Wolman, D., Bian, W., Mitchell, L. A., Boldt, B., Douglas, D., Wilson, E., Choi, J., Xie, L., Yushkevich, P., Digiacomo, P., Wongsripuemtet, J., Parekh, M., Fiehler, J., Do, H., Lopez, J., Rosenerg, J., Camarillo, D. B., Grant, G., Wintermark, M., Zeineh, M.
Journal of Neurotrauma, Oct 2019: 2762-2773.
http://doi.org/10.1089/neu.2018.6357
PDF

Validation of the NeuroImaging Radiological Interpretation System for Acute Traumatic Brain Injury.

Zhou, B., Ding, V. Y., Li, Y., Ball, R. L., Jiang, B., Zhu, G., Boothroyd, D., Zeineh, M., and Wintermark, M.
Journal of Computer Assisted Tomography, Sep 2019, 43(5), 690–696.
https://doi.org/10.1097/RCT.0000000000000913
PDF

RNA-Sequencing Analysis Revealed a Distinct Motor Cortex Transcriptome in Spontaneously Recovered Mice After Stroke.

Ito, M., Aswendt, M., Lee, A. G., Ishizaka, S., Cao, Z., Wang, E. H., Levy, S.L., Smerin, D.L., McNab, J.A., Zeineh, M., Leuze, C., Goubran, M., Cheng, M.Y., and Steinberg, G. K..
Stroke, Aug. 2019, 49(9), 2191–2199.
https://doi.org/10.1161/STROKEAHA.118.021508
PDF

Stability of blood biomarkers of traumatic brain injury.

Rezaii, P. G., Grant, G. A., Zeineh, M. M., Richardson, K. J., Coburn, M. L., Bet, A. M., Weber, A., Jiang, B., Li, Y., Ubungen, K., Routh, G., Wheatcroft, A.M., Paulino, A.D., Hayes, R.L., Steinberg, G.K., and Wintermark, M.
Journal of Neurotrauma, Jul. 2019, 36(16), 2407–2416.
https://doi.org/10.1089/neu.2018.6053
PDF

Rigid Motion Correction for Brain PET/MR Imaging Using Optical Tracking.

Spangler-Bickell, M. G., Khalighi, M. M., Hoo, C., DiGiacomo, P. S., Maclaren, J., Aksoy, M., Rettmann, D., Bammer, R.,  Zaharchuk, G., Zeineh, M., and Jansen, F.
IEEE Transactions on Radiation and Plasma Medical Sciences, Jul. 2019, 3(4), 498–503.
https://doi.org/10.1109/trpms.2018.2878978
PDF

MR susceptibility contrast imaging using a 2D simultaneous multi-slice gradient-echo sequence at 7T.

Bian, W., Kerr, A. B., Tranvinh, E., Parivash, S., Zahneisen, B., Han, M. H., Lock, C.B., Goubran, M., Zhu, K., Rutt, B.K., and Zeineh, M. M.
PLoS ONE, Jul. 2019, 14(7), 1–15
https://doi.org/10.1371/journal.pone.0219705
PDF

Lateral impacts correlate with falx cerebri displacement and corpus callosum trauma in sports-related concussions.

Hernandez, F., Giordano, C., Goubran, M., Parivash, S., Grant, G., Zeineh, M., and Camarillo, D.
Biomechanics and Modeling Mechanobiology, Mar. 2019, 18, 631–649.
https://doi.org/10.1007/s10237-018-01106-0
PDF

Neuroimaging Radiological Interpretation System for Acute Traumatic Brain Injury.

Wintermark, M., Li, Y., Ding, V. Y., Xu, Y., Jiang, B., Ball, R. L., Zeineh, M., Gean, A., Sanelli, P.
Journal of Neurotrauma, Nov. 2018, 35(22), 2665–2672.
https://doi.org/10.1089/neu.2017.5311
PDF

Resting-State Functional MRI: Everything That Nonexperts Have Always Wanted to Know.

H. Lv, Z. Wang, E. Tong, L.M. Williams, G. Zaharchuk, M. Zeineh, A.N. Goldstein-Piekarski, T.M. Ball, C. Liao and M. Wintermark.
American Journal of Neuroradiology, Aug 2018, 39 (8), 1390-1399
https://doi.org/10.3174/ajnr.A5527
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Diffusion MRI tractography for improved transcranial MRI-guided focused ultrasound thalamotomy targeting for essential tremor.

Tian, Q., Wintermark, M., Jeffrey Elias, W., Ghanouni, P., Halpern, C. H., Henderson, J. M., Huss, D.S., Goubran, M., Thaler, C., Airan, R., Zeineh, M., Butts Pauly, K., and McNab, J. A.
NeuroImage: Clinical, Sep. 2017, 19, 572–580.
https://doi.org/10.1016/j.nicl.2018.05.010
PDF

Direct Visualization and Mapping of the Spatial Course of Fiber Tracts at Microscopic Resolution in the Human Hippocampus.

Zeineh, M. M., Palomero-Gallagher, N., Axer, M., Graessel, D., Goubran, M., Wree, A., Woods, R., Amunts, K., and Zilles, K.
Cerebral Cortex, Mar. 2017, Volume 27, Issue 3, Pages 1779–1794.
https://doi.org/10.1093/cercor/bhw010
PDF

The separate effects of lipids and proteins on brain MRI contrast revealed through tissue clearing.

Leuze C, Aswendt M, Ferenczi E, Liu CW, Hsueh B, Goubran M, Tian Q, Steinberg G, Zeineh MM, Deisseroth K, McNab J., and Wintermark M
NeuroImage, 2017 Aug; 156:412-22. 
PMID: 28411157
pdf

Reducing Functional MR Imaging Acquisition Times by Optimizing Workflow.

Chwang WB, Iv M, Smith J, Kalnins A, Mickelsen J, Bammer R, Fleischmann D, Larson DB, Wintermark M, Zeineh MM
Radiographics. 2017 Jan-Feb;37(1):316-322. doi: 10.1148/rg.2017160035. 
PMID: 28076003
pdf 

The "White Gray Sign" Identifies the Central Sulcus on 3T High-Resolution T1-Weighted Images.

Kaneko OF, Fischbein NJ, Rosenberg J, Wintermark M, Zeineh MM
AJNR American Journal of Neuroradiology. 2017 Feb;38(2):276-280. doi: 10.3174/ajnr.A5014 
PMID: 27932507
pdf 

In Vivo 7T MR Quantitative Susceptibility Mapping Reveals Opposite Susceptibility Contrast between Cortical and White Matter Lesions in Multiple Sclerosis.

Bian W, Tranvinh E, Tourdias T, Han M, Liu T, Wang Y, Rutt BK, Zeineh MM
American Journal of Neuroradiology. 2016 
PMID: 27282860
pdf 

Direct Visualization and Mapping of the Spatial Course of Fiber Tracts at Microscopic Resolution in the Human Hippocampus.

Zeineh MM, Palomero-Gallagher N, Axer M, Gräβel D, Goubran M, Wree A, Woods R, Amunts K, Zilles K.
Cerebral Cortex. 2016 
PMID: 26874183 [PubMed - in process]
pdf    Supplementary Material

Activated iron-containing microglia in the human hippocampus identified by magnetic resonance imaging in Alzheimer disease.

Zeineh MM, Chen Y, Kitzler HH, Hammond R, Vogel H, Rutt BK.
Neurobiology of Aging. 2015 Jun 6. pii: S0197-4580(15)00306-1. doi: 10.1016/j.neurobiolaging.2015.05.022. 
PMID: 26190634 [PubMed - in process]
pdf

Right arcuate fasciculus abnormality in chronic fatigue syndrome.

Zeineh MM, Kang J, Atlas SW, Raman MM, Reiss AL, Norris JL, Valencia I, Montoya JG.
Radiology. 2015 Feb;274(2):517-26. doi: 10.1148/radiol.14141079. Epub 2014 Oct 29.
PMID: 25353054 [PubMed - in process]
pdf

Ultra-high resolution in-vivo 7.0T structural imaging of the human hippocampus reveals the endfolial pathway.

Parekh MB, Rutt BK, Purcell R, Chen Y, Zeineh MM.
Neuroimage. 2015 Feb 19;112:1-6. doi: 10.1016/j.neuroimage.2015.02.029. [Epub ahead of print]
PMID: 25701699 [PubMed - as supplied by publisher]
pdf

Ultrahigh-resolution imaging of the human brain with phase-cycled balanced steady-state free precession at 7 T.

Zeineh MM, Parekh MB, Zaharchuk G, Su JH, Rosenberg J, Fischbein NJ, Rutt BK.
Invest Radiol. 2014 May;49(5):278-89. doi: 10.1097/RLI.0000000000000015.
PMID: 24473366 [PubMed - indexed for MEDLINE]
pdf

Ultra-high resolution diffusion tensor imaging of the microscopic pathways of the medial temporal lobe.

Zeineh MM, Holdsworth S, Skare S, Atlas SW, Bammer R.
Neuroimage. 2012 Sep;62(3):2065-82. doi: 10.1016/j.neuroimage.2012.05.065. Epub 2012 Jun 5.
PMID: 22677150 [PubMed - indexed for MEDLINE] Free PMC Article
pdf

Dynamics of the hippocampus during encoding and retrieval of face-name pairs.

Zeineh MM, Engel SA, Thompson PM, Bookheimer SY.
Science. 2003 Jan 24;299(5606):577-80.
PMID: 12543980 [PubMed - indexed for MEDLINE] Free Article
pdf, supplementary

Challenges of High-resolution Diffusion Imaging of the Human Medial Temporal Lobe in Alzheimer Disease.

Zeineh MM, Holdsworth S, Skare S, Atlas SW, Bammer R.
Top Magn Reson Imaging. 2010 Dec;21(6):355-65. doi: 10.1097/RMR.0b013e31823f6413. Review.
PMID: 22158129 [PubMed - indexed for MEDLINE] Free PMC Article
pdf

Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: Towards a harmonized segmentation protocol.

Yushkevich PA, Amaral RS, Augustinack JC, Bender AR, Bernstein JD, Boccardi M, Bocchetta M, Burggren AC, Carr VA, Chakravarty MM, Chételat G, Daugherty AM, Davachi L, Ding SL, Ekstrom A, Geerlings MI, Hassan A, Huang Y, Iglesias JE, La Joie R, Kerchner GA, LaRocque KF, Libby LA, Malykhin N, Mueller SG, Olsen RK, Palombo DJ, Parekh MB, Pluta JB, Preston AR, Pruessner JC, Ranganath C, Raz N, Schlichting ML, Schoemaker D, Singh S, Stark CE, Suthana N, Tompary A, Turowski MM, Van Leemput K, Wagner AD, Wang L, Winterburn JL, Wisse LE, Yassa MA, Zeineh MM; Hippocampal Subfields Group (HSG).

Neuroimage. 2015 Jan 14. pii: S1053-8119(15)00007-5. doi: 10.1016/j.neuroimage.2015.01.004. [Epub ahead of print]
PMID: 25596463 [PubMed - as supplied by publisher]
pdf

Shared vulnerability of two synaptically-connected medial temporal lobe areas to age and cognitive decline: a seven tesla magnetic resonance imaging study.

Kerchner GA, Bernstein JD, Fenesy MC, Deutsch GK, Saranathan M, Zeineh MM, Rutt BK.
J Neurosci. 2013 Oct 16;33(42):16666-72. doi: 10.1523/JNEUROSCI.1915-13.2013.
PMID: 24133269 [PubMed - indexed for MEDLINE] Free PMC Article
pdf

Reduced cortical thickness in hippocampal subregions among cognitively normal apolipoprotein E e4 carriers.

Burggren AC, Zeineh MM, Ekstrom AD, Braskie MN, Thompson PM, Small GW, Bookheimer SY.
Neuroimage. 2008 Jul 15;41(4):1177-83. doi: 10.1016/j.neuroimage.2008.03.039. Epub 2008 Apr 4.
PMID: 18486492 [PubMed - indexed for MEDLINE] Free PMC Article
pdf

A dissociation of encoding and retrieval processes in the human hippocampus.

Eldridge LL, Engel SA, Zeineh MM, Bookheimer SY, Knowlton BJ.
J Neurosci. 2005 Mar 30;25(13):3280-6.
PMID: 15800182 [PubMed - indexed for MEDLINE] Free Article

Dynamics of the hippocampus during encoding and retrieval of face-name pairs.

Zeineh MM, Engel SA, Thompson PM, Bookheimer SY.
Science. 2003 Jan 24;299(5606):577-80.
PMID: 12543980
pdf     supplementary material

Unfolding the human hippocampus with high resolution structural and functional MRI.

Zeineh MM, Engel SA, Thompson PM, Bookheimer SY.
Anat Rec. 2001 Apr;265(2):111-20. Review.
PMID: 11323773 [PubMed - indexed for MEDLINE] Free Article

Rapid and effective correction of RF inhomogeneity for high field magnetic resonance imaging.

Cohen MS, DuBois RM, Zeineh MM.
Hum Brain Mapp. 2000 Aug;10(4):204-11.
PMID: 10949058 [PubMed - indexed for MEDLINE]

Application of cortical unfolding techniques to functional MRI of the human hippocampal region.

Zeineh MM, Engel SA, Bookheimer SY.
Neuroimage. 2000 Jun;11(6 Pt 1):668-83.
PMID: 10860795 [PubMed - indexed for MEDLINE]