Stephen A. BaccusAcademic Appointments
Appointment
Organization
Assistant Professor
Member
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Honors & Awards
Title
Organization
Date(s)
McKnight Scholar Award
McKnight Endowment Fund
2007-2010
Sloan Fellow
Alfred P. Sloan Foundation
2007-2009
Vision Research Grant
Karl Kirchgessner Foundation
2005
Pew Scholar
Pew Charitable Trusts
2005-2009
Terman Fellow
Stanford University
2004-2007
Research Interests
We study how the circuitry of the retina translates the visual scene into electrical impulses in the optic nerve. Visual perception is initiated by the molecules, cells and synapses of the retina, acting together to process and compress visual information into a sequence of spikes in a population of nerve fibers. One of the largest gaps in neuroscience lies in the explaining of systems-level processes like visual processing in terms of cellular-level mechanisms. This problem is tractable in the retina because of its experimental accessibility, and the substantial amount already known about basic retinal cell types and functions.
Our goal is to explain specific retinal visual processes such as adaptation to contrast and image statistics, and the detection of moving objects. To do this, we use a versatile set of experimental and theoretical techniques. While projecting visual scenes from a video monitor onto the isolated retina, an extracellular multielectrode array is used to record a substantial fraction of the output of a small patch of retina. Simultaneously, we record intracellularly from retinal interneurons in order to monitor and perturb single cells as the circuit operates. Additionally, we use two-photon laser-scanning imaging as a way to access subcellular neural structures with minimal disturbance from the infrared laser. Finally, all of this data is assembled and interpreted in the context of mathematical models to predict and explain the output of the retinal circuit.
Our goal is to explain specific retinal visual processes such as adaptation to contrast and image statistics, and the detection of moving objects. To do this, we use a versatile set of experimental and theoretical techniques. While projecting visual scenes from a video monitor onto the isolated retina, an extracellular multielectrode array is used to record a substantial fraction of the output of a small patch of retina. Simultaneously, we record intracellularly from retinal interneurons in order to monitor and perturb single cells as the circuit operates. Additionally, we use two-photon laser-scanning imaging as a way to access subcellular neural structures with minimal disturbance from the infrared laser. Finally, all of this data is assembled and interpreted in the context of mathematical models to predict and explain the output of the retinal circuit.
Publications
- Asher A, Segal WA, Baccus SA, Yaroslavsky LP, Palanker DV "Image processing for a high-resolution optoelectronic retinal prosthesis." IEEE Trans Biomed Eng 2007; 54: 6 Pt 1: 993-1004 More »
- Baccus SA, "From a whisper to a roar: adaptation to the mean and variance of naturalistic sounds." Neuron 2006; 51: 6: 682-4 More »
- Baccus SA, "Timing and Computation in Inner Retinal Circuitry." Annu Rev Physiol 2006; More »
- Palanker D, Vankov A, Huie P, Baccus S "Design of a high-resolution optoelectronic retinal prosthesis." J Neural Eng 2005; 2: 1: S105-20 More »
- Hosoya T, Baccus SA, Meister M "Dynamic predictive coding by the retina." Nature 2005; 436: 7047: 71-7 More »
8 publications: view full list
