Heads up: DNA study taps into evolution of beer yeasts

Lager lovers convinced that their beer of choice stands alone should prepare to drink their words this Oktoberfest. New research by geneticists at the School of Medicine indicates that the brew, which accounts for the majority of commercial beer production worldwide, owes its existence to an unlikely pairing between two species of yeast - one of which has been used for thousands of years to make ale.

Centuries ago brewers unknowingly used yeast genetics to make a tastier beer.

The research offers a glimpse into the early history of beer brewing, as well as an unheralded sneak peek at the early days of the evolution of a new yeast species. Then, as now, brewers reused yeast in several successive fermentation batches, serendipitously selecting for the traits that made for desirable beer.

'These long-ago brewers were practicing genetics without even knowing it,' said geneticist Gavin Sherlock, PhD. 'They've given us a very interesting opportunity to look at a relatively young, rapidly changing species, as well as some very good beer.' The research was published online Sept. 11 in Genome Research.

It all started with some unhappy Bavarians. Dissatisfied with the quality of beer brewed in the summer months, they forbade brewing the beverage when the weather was warm. However, colder winter temperatures inhibited fermentation by the ale yeast that had been used for hundreds of years and fostered an unlikely pairing with a second, heartier species - producing an unusual crisp, clear brew that became today's lager.

Sherlock, an assistant professor of genetics, and Barbara Dunn, PhD, a senior research associate at the medical school, studied the genetic sequences of 17 unique lager yeast strains from breweries in Europe and the United States. They used customized DNA microarrays capable of analyzing the relative contribution of each parent, combined with limited DNA sequencing, to determine that the hybridization event actually occurred not once, as previously speculated, but twice. This genetic encore suggests that each partner brought specific, unique advantages to the match.

'It's possible that the ale strain provides a certain flavor profile, while the second strain conferred the ability to ferment at cooler temperatures,' said Dunn. 'Mixing them together is a nice way for the yeast to double its genetic options.'

Traditionally, ales are fruity-flavored and likely to be cloudy. Although they may have a more complex flavor profile than lagers, they are best consumed at warmer temperatures and are less stable. In fact, the word 'lager' is a derivative of a German word that means 'storage.'

Most yeast reproduce primarily by asexual budding - pinching off one identical daughter cell after first duplicating the parent's genetic material. Occasionally they go through sexual reproduction and form spores that can mate with another spore of the same species and then continue to bud asexually. The parental strains of the lager yeast chose yet another path. They looked outside their own kind, hybridizing (or fusing) to form a blend of both species better suited to colder conditions.

The participants in this microscopic alliance were members of a larger genus known as Saccharomyces. One species in the group, Saccharomyces cerevisiae, also known as 'bakers' yeast,' has been used for thousands of years to make both bread and ale; it grows best at temperatures between about 85 and 90 degrees Fahrenheit. The other, S. bayanus, grows best at about 70 to 75 degrees and can tolerate even colder temperatures. Together they formed a lineage known as S. pastorianus. Sherlock and Dunn compared the S. cerevisiae parent of pastorianus to a variety of strains, including those involved in fermenting wine and sake, before pegging it as an ale-specific strain.

As often happens, the offspring of such an unconventional union exhibited abnormal amounts of genetic material. The researchers believe that one lineage began with approximately equal amounts of each yeast's genome, while the other has between two to three more times S. cerevisiae than S. bayanus DNA.

Studying the spread of the two groups offers a genetic snapshot of lager brewing in Europe over the past 600 years. One lineage is associated primarily with Carlsberg breweries in Denmark and breweries in the Czech Republic and Slovokia. The other group localizes to breweries in the Netherlands, including Heineken.

The research was funded by the National Institutes of Health and the National Science Foundation.