Chichilnisky Lab Publications

Greschner M, Heitman AK, Field GD, Li PH, Ahn D, Sher A, Litke AM, Chichilnisky EJ (2016) Identification of a retinal circuit for recurrent suppression using indirect electrical imaging. Current Biology 26:1935-1942 [reprint]

Richard E, Goetz GA, & Chichilnisky EJ (2016). Recognizing retinal ganglion cells in the dark. Advances in Neural Information Processing Systems 28: 2467-2475. [reprint]

Freeman J, Field GD, Li PH, Greschner M, Gunning DE, Mathieson K, Sher A, Litke AM, Paninski L, Simoncelli EP, Chichilnisky EJ (2015). Mapping nonlinear receptive field structure in primate retina at single cone resolution. eLife 2015;4: e05241. [reprint]

Latimer KW, Chichilnisky EJ, Rieke F & Pillow JW (2015). Inferring synaptic conductances from spike trains with a biophysically inspired point process model. Advances in Neural Information Processing Systems 27:954-962. [reprint]

Li PH, Gauthier JL, Schiff M, Sher A, Ahn D, Field GD, Greschner M, Callaway EM, Litke AJ, Chichilnisky EJ (2015). Anatomical identification of extracellularly recorded cells in large-scale multielectrode recordings. Journal of Neuroscience 35:4663-4675. [reprint]

Jepson LH, Hottowy P, Weiner GA, Dabrowski W, Litke AM, & Chichilnisky EJ (2014). High-fidelity reproduction of spatiotemporal visual signals for retinal prosthesis. Neuron 83(1):87-92. [reprint]

Jepson LH, Hottowy P, Mathieson K, Gunning D, Dabrowski W, Litke AM, & Chichilnisky EJ (2014) Spatially patterned electrical stimulation to enhance resolution of retinal prostheses. Journal of Neuroscience 34:4871-4881. [reprint]

Greschner M, Field GD, Li PL, Schiff M, Gauthier J, Ahn D, Sher A, Litke AM & Chichilnisky EJ (2014).  A polyaxonal amacrine cell population in the primate retinaJournal of Neuroscience 34:3597-3606. [reprint]

Li PL, Field GD, Greschner M, Ahn D, Gunning DE, Mathieson M, Sher A, Litke AM & Chichilnisky EJ (2014). Retinal representation of the elementary visual signal.  Neuron 81:130-139. [reprint]

Pillow JW, Shlens J, Chichilnisky EJ, Simoncelli EP (2013). A model-based spike sorting algorithm for removing correlation artifacts in multi-neuron recordings. PLoS One 8(5):e62123. doi: 10.1371/journal.pone.0062123. [reprint]

Jepson LH, Hottowy P, Mathieson M, Gunning DE, Dabrowski W, Litke AM & Chichilnisky EJ (2013). Focal electrical stimulation of major ganglion cell types in the primate retina for the design of visual prostheses. Journal of Neuroscience 33:7194-7205. [reprint]

Sadeghi K, Gauthier JL, Field GD, Greschner M, Agne M, Chichilnisky EJ & Paninski L (2013). Monte Carlo methods for localization of cones given multielectrode retinal ganglion cell recordings. Network 24:27-51. [reprint]

Doi E, Gauthier JL, Field GD, Shlens J, Sher A, Greschner M, Machado T, Jepson LH, Mathieson K, Gunning DE, Litke AM, Chichilnisky EJ & Simoncelli EP (2012). Efficient coding of spatial information in the primate retina. Journal of Neuroscience 32:16256-16284. [reprint]

Vidne M, Ahmadian Y, Shlens J, Pillow JW, Kulkarni J, Litke AM, Chichilnisky EJ, Simoncelli E & Paninski L (2012). Modeling the impact of common noise inputs on the network activity of retinal ganglion cells. J. Comp. Neurosci. 33:97-121. [reprint]

Ala-Laurila P, Greschner M, Chichilnisky EJ & Rieke FM (2011). Cone photoreceptor contributions to noise and correlations in the retinal output. Nature Neuroscience 14:1309. [reprint]

Sekirnjak C, Jepson LH, Hottowy P, Sher A, Dabrowski W, Litke AM & Chichilnisky EJ (2011). Changes in physiological properties of rat ganglion cells during retinal degeneration. Journal of Neurophysiology 105:2560. [reprint]

Greschner M, Shlens J, Bakolitsa T, Field GD, Gauthier JL, Jepson LH, Sher A, Litke AM & Chichilnisky EJ (2011). Correlated firing among major ganglion cell types in primate retina. Journal of Physiology 589:75. [reprint]

Field GD, Gauthier JL, Sher A, Greschner M, Machado TA, Jepson LH, Shlens J, Gunning DE, Mathieson K, Dabrowski W, Paninski L, Litke AM & Chichilnisky EJ (2010). Functional connectivity in the retina at the resolution of photoreceptors. Nature 467:673. [reprint] [supplement] [news & views] [F1000 evaluation]

Anishchenko A, Greschner M, Elstrott J, Sher A, Litke AM, Feller M & Chichilnisky EJ (2010) Receptive field mosaics of retinal ganglion cells are established without visual experience. Journal of Neurophysiology 103:1856. [reprint]

Sekirnjak C, Hulse C, Jepson LH, Hottowy P, Sher A, Dabrowski W, Litke AM & Chichilnisky EJ (2009) Loss of responses to visual but not electrical stimulation in ganglion cells of rats with severe photoreceptor degeneration. Journal of Neurophysiology 102:3260. [reprint]

Field GD, Greschner M, Gauthier JL, Rangel C, Shlens J, Sher A, Marshak DW, Litke AM, & Chichilnisky EJ (2009). High sensitivity rod photoreceptor input to blue-yellow color opponent pathway in primate retina. Nature Neuroscience 12:1159. [reprint]

Shlens J, Field GD, Gauthier JL, Greschner M, Sher A, Litke AM, & Chichilnisky EJ (2009) The structure of large-scale synchronized firing in primate retina. Journal of Neuroscience 29:5022-5031. [reprint]

Gauthier JL, Field GD, Sher A, Greschner M, Shlens J, Litke AM, & Chichilnisky EJ (2009) Receptive fields in primate retina are coordinated to sample visual space more uniformly. PLoS Biology 7:1. e63 DOI: 10.1371/journal.pbio.1000063. [reprint] [F1000 evaluation]

Gauthier JL, Field GD, Sher A, Shlens J, Greschner M, Litke AM, & Chichilnisky EJ (2009) Uniform signal redundancy of parasol and midget ganglion cells in primate retina. Journal of Neuroscience 29:4675-4680. [reprint]

Shlens J, Rieke FM & Chichilnisky EJ (2008). Synchronized firing in the retina. Current Opinion in Neurobiology 18:1-7.[reprint]

Pillow JW, Shlens J, Paninski L, Sher A, Litke AM, Chichilnisky EJ & Simoncelli EP (2008). Spatio-temporal correlations and visual signalling in a complete neuronal population. Nature 454:995-9. [reprint] [F1000 evaluation]

Elstrott J, Anishchenko A, Greschner M, Sher A, Litke AM, Chichilnisky EJ & Feller MB (2008) Direction selectivity in the retina is established independent of visual experience and cholinergic retinal waves. Neuron 58:499-506. [reprint]

Sekirnjak C, Hottowy P, Sher A, Dabrowski W, Litke AM, & Chichilnisky EJ (2008) High-resolution electrical stimulation of primate retina for epiretinal implant design. Journal of Neuroscience 28:4446-4456. [reprint] [journal cover]

Sekirnjak C, Hottowy P, Sher A, Dabrowski W, Litke AM & Chichilnisky EJ (2007). Electrical stimulation of mammalian retinal ganglion cells using dense arrays of small-diameter electrodes. In: Artificial Sight; Springer Series Biological and Medical Physics/Biomedical Engineering, edited by Humayun MS, Weiland JD, Chader G & Greenbaum E. Springer (New York). pp 333-345. [reprint]

Field GD, Sher A, Gauthier JL, Greschner M, Shlens J, Litke AM, & Chichilnisky EJ (2007) Spatial properties and functional organization of small bistratified ganglion cells in primate retina. Journal of Neuroscience 27(48):13261-13272. [reprint]

Petrusca D, Grivich MI, Sher A, Field GD, Gauthier JL, Greschner M, Shlens J, Chichilnisky EJ, & Litke AM (2007) Identification and characterization of a Y-like primate retinal ganglion cell type. Journal of Neuroscience 27(41):11019-11027. [reprint] [supplement] [F1000 evaluation]

Field GD & Chichilnisky EJ (2007) Information processing in the primate retina: circuitry and coding. Annual Review of Neuroscience 30:1-30. [reprint]

Shlens J, Kennel MB, Abarbanel HDI & Chichilnisky EJ (2007) Estimating information rates with confidence intervals in neural spike trains. Neural Computation 19(7):1683-1719. [reprint]

Horwitz GD, Chichilnisky EJ & Albright TD (2007) Cone inputs to simple and complex cells in V1 of awake macaque. Journal of Neurophysiology 97(4):3070-3081. [reprint]

Shlens J, Field GD, Gauthier JL, Grivich MI, Petrusca D, Sher A, Litke AM, & Chichilnisky EJ (2006) The structure of multi-neuron firing patterns in primate retina. Journal of Neuroscience 26(32):8254-8266. [reprint] [F1000 evaluation] [journal cover]

Sekirnjak C, Hottowy P, Sher A, Dabrowski W, Litke AM, & Chichilnisky EJ (2006) Electrical stimulation of mammalian retinal ganglion cells with multi-electrode arrays. Journal of Neurophysiology 95:3311-3327. [reprint] [journal cover]

Pillow JW, Paninski L, Uzzell VJ, Simoncelli EP, & Chichilnisky EJ (2005) Prediction and decoding of retinal ganglion cell responses with a probabilistic spiking model. Journal of Neuroscience 25(47):11003-11013. [reprint] [F1000 evaluation]

Frechette ES, Sher A, Grivich MI, Petrusca D, Litke AM, & Chichilnisky EJ (2005) Fidelity of the ensemble code for visual motion in primate retina. Journal of Neurophysiology 94(1):119-135. [reprint]

Chichilnisky EJ & Rieke F (2005) Detection sensitivity and temporal resolution of visual signals near absolute threshold in the salamander retina. Journal of Neuroscience 25(2):313-330. [reprint]

Kennel MB, Shlens J, Abarbanel HDI & Chichilnisky EJ (2005) Estimating entropy rates with Bayesian confidence intervals. Neural Computation 17:1531. [reprint]

Horwitz GD, Chichilnisky EJ & Albright TD (2005) Blue-Yellow signals are enhanced by spatiotemporal luminance contrast in macaque V1. Journal of Neurophysiology 93(4):2263-78. [reprint]

Uzzell VJ & Chichilnisky EJ (2004) Precision of spike trains in primate retinal ganglion cells. Journal of Neurophysiology 92:780-789. [reprint]

Litke AM, Bezayiff N, Chichilnisky EJ, Cunningham W, Dabrowski W, Grillo AA, Grivich M, Grybos P, Hottowy P, Kachiguine S, Kalmar RS, Mathieson K, Petrusca D, Rahman M & Sher A (2004) What does the eye tell the brain? Development of a system for the large scale recording of retinal output activity. IEEE Transactions on Nuclear Science 51(4):1434-1440 [reprint]

Chichilnisky EJ & Kalmar RS (2003) Temporal resolution of ensemble visual motion signals in primate retina. Journal of Neuroscience 23(17):6681-6689. [reprint]

Chichilnisky EJ & Kalmar RS (2002) Functional asymmetries in ON and OFF ganglion cells of primate retina. Journal of Neuroscience 22(7):2737-47. [reprint]

Schwartz O, Chichilnisky EJ & Simoncelli EP (2002) Characterizing neural gain control using spike-triggered covariance. Neural Information Processing Systems 14:269-276. [reprint]

Chander D & Chichilnisky EJ (2001) Adaptation to temporal contrast in primate and salamander retina. Journal of Neuroscience 21(24):9904-16. [reprint]

Chichilnisky EJ (2001) A simple white noise analysis of neuronal light responses. Network 12(2):199-213. [reprint]

Previous Publications

Chichilnisky EJ & Baylor DA (1999) Receptive-field microstructure of blue-yellow ganglion cells in primate retina. Nature Neuroscience 2(10):889-893. [reprint] [journal cover]

Chichilnisky EJ & Wandell BA (1999) Trichromatic opponent-color classification. Vision Research 39(20):3444-3458. [reprint]

Chichilnisky EJ & Wandell BA (1996) Seeing gray through the ON and OFF pathways. Visual Neuroscience 13:591-596 [reprint]

Chichilnisky EJ & Wandell BA (1995) Photoreceptor sensitivity changes explain color appearance shifts induced by large uniform backgrounds in dichoptic matching. Vision Research 35(2):239-254. [reprint]

Engel SA, Rumelhart DE, Wandell BA, Lee AT, Glover GH, Chichilnisky EJ & Shadlen MN (1994.) fMRI of human visual cortex. Nature 369:525. [reprint]

Chichilnisky EJ & Wandell BA (1993) Functional segregation of color and motion perception examined in motion nulling. Vision Research 33(15):2113-2125. [reprint]

Chichilnisky EJ (1986) A mathematical model of pattern formation. Journal of Theoretical Biology 123:81-101. [reprint]