Joint Genetics and Developmental Biology Journal Club
Mondays in Genetics Library
Date | Presenter | Paper |
---|---|---|
5/4/20 |
Jess Rhodes |
Cows painted with zebra-like striping can avoid biting fly attack |
4/27/20 |
Zhuang Miao |
|
4/20/20 |
Michael Hayes |
COVID-19 Antibody Seroprevalence in Santa Clara County, California |
4/20/20 |
Ann Lin |
|
4/13/20 |
Sierra Bowden |
Mechanistic insights of the Min oscillator via cell-free reconstitution and imaging |
4/13/20 |
Subheksha Kc |
Reward, Addiction and Emotion Regulation Systems Associated with Rejection in Love |
4/6/20 |
Grace Jean |
|
4/6/20 |
Connor Duffy |
Clonally expanded CD8 T cells patrol the cerebrospinal fluid in Alzheimer’s disease |
3/2/20 |
Sarah Stern |
|
2/24/20 |
Alyssa Benjamin |
|
2/24/20 |
Mollie Friedlander |
The Sorting Hat of Medicine: Why Hufflepuffs Wear Stethoscopes and Slytherins Carry Scalpels |
2/10/20 |
Dylan Maghini |
|
2/10/20 |
Page Goddard |
|
2/3/20 |
Rosa Ma |
|
2/3/20 |
Emily Greenwald |
fMRI to assess people’s emotional responses to Harry Potter passages |
1/27/20 |
Jason Cheng |
Comprehensive AAV capsid fitness landscape reveals a viral gene and enables machine-guided design |
1/13/20 |
Naz Koska |
|
1/13/20 |
Danny Cotter |
Screening human embryos for polygenic scores has limited utility |
1/6/20 |
Keri Ngo |
Light-regulated collective contractility in choanoflagellates |
1/6/20 |
Rachel Ungar |
|
9/30/19 |
Hannah Rosenblatt |
|
6/10/19 |
Alyssa Benjamin |
Guiblet, W.M., Cremona, M.A., Cechova, M., Harris, R.S., Kejnovska, I., Kejnovsky, E., Eckert, K., Chiaromonte, F. and Makova, K.D., 2018. Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate. Genome research, 28(12), pp.1767-1778. |
6/10/19 |
Dylan Maghini |
Hsu, B.B., Gibson, T.E., Yeliseyev, V., Liu, Q., Lyon, L., Bry, L., Silver, P.A. and Gerber, G.K., 2019. Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model. Cell host & microbe. |
6/3/19 |
Rosa Ma |
Velmeshev, D., Schirmer, L., Jung, D., Haeussler, M., Perez, Y., Mayer, S., Bhaduri, A., Goyal, N., Rowitch, D.H. and Kriegstein, A.R., 2019. Single-cell genomics identifies cell type–specific molecular changes in autism. Science, 364(6441), pp.685-689. |
5/20/19 |
Hannah Rosenblatt |
Kelley, L.C., Chi, Q., Cáceres, R., Hastie, E., Schindler, A.J., Jiang, Y., Matus, D.Q., Plastino, J. and Sherwood, D.R., 2019. Adaptive F-actin polymerization and localized ATP production drive basement membrane invasion in the absence of MMPs. Developmental cell, 48(3), pp.313-328. |
5/20/19 |
Daniel Cotter |
Gao, Z., Moorjani, P., Sasani, T.A., Pedersen, B.S., Quinlan, A.R., Jorde, L.B., Amster, G. and Przeworski, M., 2019. Overlooked roles of DNA damage and maternal age in generating human germline mutations. Proceedings of the National Academy of Sciences, 116(19), pp.9491-9500. |
5/13/19 |
Keri Ngo |
Musilova, Z., Cortesi, F., Matschiner, M., Davies, W.I., Patel, J.S., Stieb, S.M., de Busserolles, F., Malmstrøm, M., Tørresen, O.K., Brown, C.J. and Mountford, J.K., 2019. Vision using multiple distinct rod opsins in deep-sea fishes. Science, 364(6440), pp.588-592. |
5/13/19 |
Rachel Ungar |
Dance, A., 2019. Why the sexes don't feel pain the same way. Nature, 567(7749), p.448. |
5/6/19 |
Roshni Patel |
Ponce, C.R., Xiao, W., Schade, P.F., Hartmann, T.S., Kreiman, G. and Livingstone, M.S., 2019. Evolving images for visual neurons using a deep generative network reveals coding principles and neuronal preferences. Cell, 177(4), pp.999-1009. |
5/6/19 |
Jarod Rutledge |
Nardou, R., Lewis, E.M., Rothhaas, R., Xu, R., Yang, A., Boyden, E. and Dölen, G., 2019. Oxytocin-dependent reopening of a social reward learning critical period with MDMA. Nature, 569(7754), p.116. |
4/29/19 |
Kathryn Hanson |
Grünewald, J., Zhou, R., Garcia, S.P., Iyer, S., Lareau, C.A., Aryee, M.J. and Joung, J.K., 2019. Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors. Nature, 569(7756), p.433. |
4/29/19 |
Eric Wong |
Anumanchipalli, G.K., Chartier, J. and Chang, E.F., 2019. Speech synthesis from neural decoding of spoken sentences. Nature, 568(7753), p.493. |
4/22/19 |
Pagé Goddard |
Vrselja, Z., Daniele, S.G., Silbereis, J., Talpo, F., Morozov, Y.M., Sousa, A.M., Tanaka, B.S., Skarica, M., Pletikos, M., Kaur, N. and Zhuang, Z.W., 2019. Restoration of brain circulation and cellular functions hours post-mortem. Nature, 568(7752), p.336. |
4/22/19 |
Mollie Friedlander |
Wu, J., Platero-Luengo, A., Sakurai, M., Sugawara, A., Gil, M.A., Yamauchi, T., Suzuki, K., Bogliotti, Y.S., Cuello, C., Valencia, M.M. and Okumura, D., 2017. Interspecies chimerism with mammalian pluripotent stem cells. Cell, 168(3), pp.473-486. |
4/15/19 |
Mervenaz Koska |
Hirose, K., Payumo, A.Y., Cutie, S., Hoang, A., Zhang, H., Guyot, R., Lunn, D., Bigley, R.B., Yu, H., Wang, J. and Smith, M., 2019. Evidence for hormonal control of heart regenerative capacity during endothermy acquisition. Science, p.eaar2038. |
4/15/19 |
Kelly Tomins |
Riddle, M.R., Aspiras, A.C., Gaudenz, K., Peuß, R., Sung, J.Y., Martineau, B., Peavey, M., Box, A.C., Tabin, J.A., McGaugh, S. and Borowsky, R., 2018. Insulin resistance in cavefish as an adaptation to a nutrient-limited environment. Nature, 555(7698), p.647. |
4/8/19 |
Gabriel Amador |
Lightfoot, J.W., Wilecki, M., Rödelsperger, C., Moreno, E., Susoy, V., Witte, H. and Sommer, R.J., 2019. Small peptide–mediated self-recognition prevents cannibalism in predatory nematodes. Science, 364(6435), pp.86-89. |
4/8/19 |
Jason Cheng |
Zada, D., Bronshtein, I., Lerer-Goldshtein, T., Garini, Y. and Appelbaum, L., 2019. Sleep increases chromosome dynamics to enable reduction of accumulating DNA damage in single neurons. Nature communications, 10(1), p.895. |
3/18/19 |
Adele Xu |
Farrelly, L.A., Thompson, R.E., Zhao, S., Lepack, A.E., Lyu, Y., Bhanu, N.V., Zhang, B., Loh, Y.H.E., Ramakrishnan, A., Vadodaria, K.C. and Heard, K.J., 2019. Histone serotonylation is a permissive modification that enhances TFIID binding to H3K4me3. Nature, p.1. |
3/18/19 |
Adam Reeves |
De Cecco, M., Ito, T., Petrashen, A.P., Elias, A.E., Skvir, N.J., Criscione, S.W., Caligiana, A., Brocculi, G., Adney, E.M., Boeke, J.D. and Le, O., 2019. L1 drives IFN in senescent cells and promotes age-associated inflammation. Nature, 566(7742), p.73. |
3/11/19 |
Kyomi Igarashi |
Pijuan-Sala, B., Griffiths, J.A., Guibentif, C., Hiscock, T.W., Jawaid, W., Calero-Nieto, F.J., Mulas, C., Ibarra-Soria, X., Tyser, R.C., Ho, D.L.L. and Reik, W., 2019. A single-cell molecular map of mouse gastrulation and early organogenesis. Nature, p.1. |
3/11/19 |
Robin Meyers |
Lebreton, G., Géminard, C., Lapraz, F., Pyrpassopoulos, S., Cerezo, D., Spéder, P., Ostap, E.M. and Noselli, S., 2018. Molecular to organismal chirality is induced by the conserved myosin 1D. Science, 362(6417), pp.949-952. |
3/4/19 |
Veronica Behrens |
Herrera-Alvarez, S., Karlsson, E., Ryder, O.A., Lindblad-Toh, K. and Crawford, A.J., 2018. How to make a rodent giant: Genomic basis and tradeoffs of gigantism in the capybara, the world's largest rodent. bioRxiv, p.424606. and Evans, B.J., Upham, N.S., Golding, G.B., Ojeda, R.A. and Ojeda, A.A., 2017. Evolution of the largest mammalian genome. Genome biology and evolution, 9(6), pp.1711-1724. |
3/4/19 |
Nicole Gay |
Saner, N.J., Bishop, D.J. and Bartlett, J.D., 2018. Is exercise a viable therapeutic intervention to mitigate mitochondrial dysfunction and insulin resistance induced by sleep loss?. Sleep medicine reviews, 37, pp.60-68. |
2/25/19 |
Rebecca Culver |
Maier, L., Pruteanu, M., Kuhn, M., Zeller, G., Telzerow, A., Anderson, E.E., Brochado, A.R., Fernandez, K.C., Dose, H., Mori, H. and Patil, K.R., 2018. Extensive impact of non-antibiotic drugs on human gut bacteria. Nature, 555(7698), p.623. |
2/25/19 |
Kelsey Fryer |
Habig, M., Kema, G.H. and Stukenbrock, E.H., 2018. Meiotic drive of female-inherited supernumerary chromosomes in a pathogenic fungus. eLife, 7, p.e40251. |
2/11/19 |
Katelyn McKown |
Yokawa, K., Kagenishi, T., Pavlovič, A., Gall, S., Weiland, M., Mancuso, S. and Baluška, F., 2017. Anaesthetics stop diverse plant organ movements, affect endocytic vesicle recycling and ROS homeostasis, and block action potentials in Venus flytraps. Annals of Botany, 122(5), pp.747-756. |
2/11/19 |
Vy Nguyen |
Kaelberer, M.M., Buchanan, K.L., Klein, M.E., Barth, B.B., Montoya, M.M., Shen, X. and Bohórquez, D.V., 2018. A gut-brain neural circuit for nutrient sensory transduction. Science, 361(6408), p.eaat5236. |
2/4/19 |
Akshay Sanghi |
Bian, S., Hou, Y., Zhou, X., Li, X., Yong, J., Wang, Y., Wang, W., Yan, J., Hu, B., Guo, H. and Wang, J., 2018. Single-cell multiomics sequencing and analyses of human colorectal cancer. Science, 362(6418), pp.1060-1063. |
2/4/19 |
Ching Pin Cheng |
Hartwick, E.W., Costantino, D.A., MacFadden, A., Nix, J.C., Tian, S., Das, R. and Kieft, J.S., 2018. Ribosome-induced RNA conformational changes in a viral 3′-UTR sense and regulate translation levels. Nature communications, 9(1), p.5074. |
1/28/19 |
Kei Yamaya |
Ünal, E., Kinde, B. and Amon, A., 2011. Gametogenesis eliminates age-induced cellular damage and resets life span in yeast. Science, 332(6037), pp.1554-1557. |
1/14/19 |
Sedona Murphy |
Gurovich, Y., Hanani, Y., Bar, O., Nadav, G., Fleischer, N., Gelbman, D., Basel-Salmon, L., Krawitz, P.M., Kamphausen, S.B., Zenker, M. and Bird, L.M., 2019. Identifying facial phenotypes of genetic disorders using deep learning. Nature medicine, 25(1), p.60. |
1/14/19 |
Jennifer Doherty |
Peters, J.M., Koo, B.M., Patino, R., Heussler, G.E., Hearne, C.C., Qu, J., Inclan, Y.F., Hawkins, J.S., Lu, C.H., Silvis, M.R. and Harden, M.M., 2019. Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi. Nature microbiology, 4(2), p.244. |
1/14/19 |
Josh Tycko |
TallBear, K., 2013. Native American DNA: tribal belonging and the false promise of genetic science. University of Minnesota Press. |
1/7/19 |
Ben Siranosian |
Suez, J., Zmora, N., Zilberman-Schapira, G., Mor, U., Dori-Bachash, M., Bashiardes, S., Zur, M., Regev-Lehavi, D., Brik, R.B.Z., Federici, S. and Horn, M., 2018. Post-antibiotic gut mucosal microbiome reconstitution is impaired by probiotics and improved by autologous FMT. Cell, 174(6), pp.1406-1423. |
12/10/18 |
Leslie Mateo |
Kragesteen, B.K., Spielmann, M., Paliou, C., Heinrich, V., Schöpflin, R., Esposito, A., Annunziatella, C., Bianco, S., Chiariello, A.M., Jerković, I. and Harabula, I., 2018. Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis. Nature genetics, 50(10), p.1463. |
12/10/18 |
Ellen Bouchard |
Herberg, S., Gert, K.R., Schleiffer, A. and Pauli, A., 2018. The Ly6/uPAR protein Bouncer is necessary and sufficient for species-specific fertilization. Science, 361(6406), pp.1029-1033. |
12/10/18 |
Alex Colville |
Jiankui He's slides from his recent talk at the Second International Summit on Human Genome Editing in Hong Kong |
12/3/18 |
Robert Coukos |
Dawe, R.K., Lowry, E.G., Gent, J.I., Stitzer, M.C., Swentowsky, K.W., Higgins, D.M., Ross-Ibarra, J., Wallace, J.G., Kanizay, L.B., Alabady, M. and Qiu, W., 2018. A Kinesin-14 motor activates neocentromeres to promote meiotic drive in maize. Cell, 173(4), pp.839-850. |
12/3/18 |
Alissa Severson |
Cornejo, O.E., Yee, M.C., Dominguez, V., Andrews, M., Sockell, A., Strandberg, E., Livingstone, D., Stack, C., Romero, A., Umaharan, P. and Royaert, S., 2018. Population genomic analyses of the chocolate tree, Theobroma cacao L., provide insights into its domestication process. Communications Biology, 1(1), p.167. |
11/12/18 |
Ben Ober-Reynolds |
Sabari, B.R., Dall’Agnese, A., Boija, A., Klein, I.A., Coffey, E.L., Shrinivas, K., Abraham, B.J., Hannett, N.M., Zamudio, A.V., Manteiga, J.C. and Li, C.H., 2018. Coactivator condensation at super-enhancers links phase separation and gene control. Science, 361(6400), p.eaar3958. |
11/12/18 |
Olivia de Goede |
Theuerkauf, J., Kuehn, R., Rouys, S., Bloc, H. and Gula, R., 2018. Fraternal Polyandry and Clannish Spatial Organization in a Flightless Island Bird. Current Biology, 28(9), pp.1482-1488. |
11/5/18 |
Trisha Chong |
Guo, M.S., Haakonsen, D.L., Zeng, W., Schumacher, M.A. and Laub, M.T., 2018. A bacterial chromosome structuring protein binds overtwisted DNA to stimulate type II topoisomerases and enable DNA replication. Cell, 175(2), pp.583-597. |
11/5/18 |
Aparna Rajpukar |
Ney, P.M., Organick, L., Koscher, K., Kohno, T. and Ceze, L., 2018. Exploiting Index Cross-Talk to Modify Variant Calls. bioRxiv, p.332346. |
10/29/18 |
BinBin Chen |
Glanville, J., Huang, H., Nau, A., Hatton, O., Wagar, L.E., Rubelt, F., Ji, X., Han, A., Krams, S.M., Pettus, C. and Haas, N., 2017. Identifying specificity groups in the T cell receptor repertoire. Nature, 547(7661), p.94. |
10/29/18 |
Laura Donohue |
Carlos Bustamante’s 2018 genetic ancestry analysis of Elizabeth Warren |
10/29/18 |
TzuChiao Hung |
Li, P., Markson, J.S., Wang, S., Chen, S., Vachharajani, V. and Elowitz, M.B., 2018. Morphogen gradient reconstitution reveals Hedgehog pathway design principles. Science, 360(6388), pp.543-548. |
10/22/18 |
David Yao |
Alexander, J.M., Guan, J., Li, B., Maliskova, L., Song, M., Shen, Y., Huang, B., Lomvardas, S. and Weiner, O.D., 2019. Live-cell imaging reveals enhancer-dependent Sox2 transcription in the absence of enhancer proximity. eLife, 8, p.e41769. |
10/22/18 |
Harmony Folse |
Coux, R.X., Teixeira, F.K. and Lehmann, R., 2018. L (3) mbt and the LINT complex safeguard cellular identity in the Drosophila ovary. Development, 145(7), p.dev160721. |
10/15/18 |
Matt Buckley |
Cleary, B., Cong, L., Cheung, A., Lander, E.S. and Regev, A., 2017. Efficient generation of transcriptomic profiles by random composite measurements. Cell, 171(6), pp.1424-1436. |
10/15/18 |
Kay Kobak |
Johnson, S.K., Fitza, M.A., Lerner, D.A., Calhoun, D.M., Beldon, M.A., Chan, E.T. and Johnson, P.T., 2018. Risky business: linking Toxoplasma gondii infection and entrepreneurship behaviours across individuals and countries. Proceedings of the Royal Society B: Biological Sciences, 285(1883), p.20180822. |
10/1/18 |
Devon Harris |
Yamashiro, C., Sasaki, K., Yabuta, Y., Kojima, Y., Nakamura, T., Okamoto, I., Yokobayashi, S., Murase, Y., Ishikura, Y., Shirane, K. and Sasaki, H., 2018. Generation of human oogonia from induced pluripotent stem cells in vitro. Science, 362(6412), pp.356-360. |
10/1/18 |
Alex Kern |
Scholes, E., Gillis, J.M. and Laman, T.G., 2017. Visual and acoustic components of courtship in the bird-of-paradise genus Astrapia (Aves: Paradisaeidae). PeerJ, 5, p.e3987. |
6/11/2018 |
Adam Reeves |
Elsner, D., Meusemann, K. and Korb, J., 2018. Longevity and transposon defense, the case of termite reproductives. Proceedings of the National Academy of Sciences, 115(21), pp.5504-5509. |
6/11/2018 |
John Vaughen |
Guo, C., Jeong, H.H., Hsieh, Y.C., Klein, H.U., Bennett, D.A., De Jager, P.L., Liu, Z. and Shulman, J.M., 2018. Tau activates transposable elements in Alzheimer’s disease. Cell reports, 23(10), pp.2874-2880. |
6/4/2018 |
Alex Kern |
Denby, C.M., Li, R.A., Vu, V.T., Costello, Z., Lin, W., Chan, L.J.G., Williams, J., Donaldson, B., Bamforth, C.W., Petzold, C.J. and Scheller, H.V., 2018. Industrial brewing yeast engineered for the production of primary flavor determinants in hopped beer. Nature communications, 9(1), p.965. |
5/21/2018 |
Katelyn McKown |
Raissig, M.T., Matos, J.L., Gil, M.X.A., Kornfeld, A., Bettadapur, A., Abrash, E., Allison, H.R., Badgley, G., Vogel, J.P., Berry, J.A. and Bergmann, D.C., 2017. Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata. Science, 355(6330), pp.1215-1218. |
5/21/2018 |
Sedona Murphy |
Ou, H.D., Phan, S., Deerinck, T.J., Thor, A., Ellisman, M.H. and O’shea, C.C., 2017. ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells. Science, 357(6349), p.eaag0025. |
5/14/2018 |
Akshay Sanghi |
Borlido, J., Sakuma, S., Raices, M., Carrette, F., Tinoco, R., Bradley, L.M. and D’Angelo, M.A., 2018. Nuclear pore complex-mediated modulation of TCR signaling is required for naïve CD4+ T cell homeostasis. Nature immunology, 19(6), p.594. |
5/14/2018 |
Kei Yamaya |
Ratzke, C., Denk, J. and Gore, J., 2018. Ecological suicide in microbes. Nature ecology & evolution, 2(5), p.867. |
5/7/2018 |
Ben Siranosian |
Collins, J., Robinson, C., Danhof, H., Knetsch, C.W., Van Leeuwen, H.C., Lawley, T.D., Auchtung, J.M. and Britton, R.A., 2018. Dietary trehalose enhances virulence of epidemic Clostridium difficile. Nature, 553(7688), p.291. |
5/7/2018 |
Ching Pin Cheng |
Pamudurti, N.R., Bartok, O., Jens, M., Ashwal-Fluss, R., Stottmeister, C., Ruhe, L., Hanan, M., Wyler, E., Perez-Hernandez, D., Ramberger, E. and Shenzis, S., 2017. Translation of circRNAs. Molecular cell, 66(1), pp.9-21. |
4/30/2018 |
Kelsey Fryer |
Jagannathan, M., Cummings, R. and Yamashita, Y.M., 2018. A conserved function for pericentromeric satellite DNA. Elife, 7, p.e34122. |
4/30/2018 |
Veronica Behrens |
Ferris, E., Abegglen, L.M., Schiffman, J.D. and Gregg, C., 2018. Accelerated evolution in distinctive species reveals candidate elements for clinically relevant traits, including mutation and cancer resistance. Cell reports, 22(10), pp.2742-2755. and Ilardo, M.A., Moltke, I., Korneliussen, T.S., Cheng, J., Stern, A.J., Racimo, F., de Barros Damgaard, P., Sikora, M., Seguin-Orlando, A., Rasmussen, S. and van den Munckhof, I.C., 2018. Physiological and genetic adaptations to diving in sea nomads. Cell, 173(3), pp.569-580. |
4/23/2018 |
Vy Nguyen |
Dekkers, J.F., Wiegerinck, C.L., De Jonge, H.R., Bronsveld, I., Janssens, H.M., De Winter-de Groot, K.M., Brandsma, A.M., De Jong, N.W., Bijvelds, M.J., Scholte, B.J. and Nieuwenhuis, E.E., 2013. A functional CFTR assay using primary cystic fibrosis intestinal organoids. Nature medicine, 19(7), p.939. |
4/23/2018 |
Nicholas Hughes |
Min, J., Noble, C., Najjar, D. and Esvelt, K.M., 2017. Daisyfield gene drive systems harness repeated genomic elements as a generational clock to limit spread. BioRxiv, p.104877. |
4/16/2018 |
Rebecca Culver |
Kim, W., Zhu, W., Hendricks, G.L., Van Tyne, D., Steele, A.D., Keohane, C.E., Fricke, N., Conery, A.L., Shen, S., Pan, W. and Lee, K., 2018. A new class of synthetic retinoid antibiotics effective against bacterial persisters. Nature, 556(7699), p.103. |
4/16/2018 |
Kyomi Igarashi |
Alemany, A., Florescu, M., Baron, C.S., Peterson-Maduro, J. and Van Oudenaarden, A., 2018. Whole-organism clone tracing using single-cell sequencing. Nature, 556(7699), p.108. |
4/9/2018 |
Robin Meyers |
Xu, L., Sin, S.Y.W., Grayson, P., Janes, D.E., Edwards, S.V. and Sackton, T.B., 2018. Evolutionary dynamics of sex chromosomes of palaeognathous birds. bioRxiv, p.295089. |
4/9/2018 |
Nicole Gay |
Zhu, Z., Zhang, F., Hu, H., Bakshi, A., Robinson, M.R., Powell, J.E., Montgomery, G.W., Goddard, M.E., Wray, N.R., Visscher, P.M. and Yang, J., 2016. Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets. Nature genetics, 48(5), p.481. |
3/19/2018 |
Jennifer Doherty |
Pastuzyn, E.D., Day, C.E., Kearns, R.B., Kyrke-Smith, M., Taibi, A.V., McCormick, J., Yoder, N., Belnap, D.M., Erlendsson, S., Morado, D.R. and Briggs, J.A., 2018. The neuronal gene Arc encodes a repurposed retrotransposon Gag protein that mediates intercellular RNA transfer. Cell, 172(1-2), pp.275-288. |
3/19/2018 |
Devon Harris |
Gazoni, T., Haddad, C.F.B., Narimatsu, H., Cabral-de-Mello, D.C., Lyra, M.L. and Parise-Maltempi, P.P., 2018. More sex chromosomes than autosomes in the Amazonian frog Leptodactylus pentadactylus. Chromosoma, 127(2), pp.269-278. |
3/12/2018 |
Leslie Mateo |
Gou, L.T., Kang, J.Y., Dai, P., Wang, X., Li, F., Zhao, S., Zhang, M., Hua, M.M., Lu, Y., Zhu, Y. and Li, Z., 2017. Ubiquitination-deficient mutations in human Piwi cause male infertility by impairing histone-to-protamine exchange during spermiogenesis. Cell, 169(6), pp.1090-1104. |
3/12/2018 |
Adele Xu |
Parks, M.M., Kurylo, C.M., Dass, R.A., Bojmar, L., Lyden, D., Vincent, C.T. and Blanchard, S.C., 2018. Variant ribosomal RNA alleles are conserved and exhibit tissue-specific expression. Science advances, 4(2), p.eaao0665. |
3/5/2018 |
Alissa Severson |
Kardos, M., Åkesson, M., Fountain, T., Flagstad, Ø., Liberg, O., Olason, P., Sand, H., Wabakken, P., Wikenros, C. and Ellegren, H., 2018. Genomic consequences of intensive inbreeding in an isolated wolf population. Nature ecology & evolution, 2(1), p.124. |
2/26/2018 |
Laura Donohue |
Frank, E.T., Schmitt, T., Hovestadt, T., Mitesser, O., Stiegler, J. and Linsenmair, K.E., 2017. Saving the injured: Rescue behavior in the termite-hunting ant Megaponera analis. Science advances, 3(4), p.e1602187. and Frank, E.T., Wehrhahn, M. and Linsenmair, K.E., 2018. Wound treatment and selective help in a termite-hunting ant. Proceedings of the Royal Society B: Biological Sciences, 285(1872), p.20172457. |
2/26/2018 |
TzuChiao Hung |
Eom, D.S. and Parichy, D.M., 2017. A macrophage relay for long-distance signaling during postembryonic tissue remodeling. Science, 355(6331), pp.1317-1320. and Eom, D.S., Bain, E.J., Patterson, L.B., Grout, M.E. and Parichy, D.M., 2015. Long-distance communication by specialized cellular projections during pigment pattern development and evolution. Elife, 4, p.e12401. |
2/12/2018 |
Matt Buckley |
Mukherjee, S., 2016. The gene: an intimidate history. Chapter |
2/5/2018 |
BinBin Chen |
Łuksza, M., Riaz, N., Makarov, V., Balachandran, V.P., Hellmann, M.D., Solovyov, A., Rizvi, N.A., Merghoub, T., Levine, A.J., Chan, T.A. and Wolchok, J.D., 2017. A neoantigen fitness model predicts tumour response to checkpoint blockade immunotherapy. Nature, 551(7681), p.517. |
1/29/2018 |
John Gorzynski |
Deane-Coe, P.E., Chu, E.T., Slavney, A., Boyko, A.R. and Sams, A.J., 2018. Direct-to-consumer DNA testing of 6,000 dogs reveals 98.6-kb duplication associated with blue eyes and heterochromia in Siberian Huskies. PLoS genetics, 14(10), p.e1007648. |
1/29/2018 |
Aparna Rajpurkar |
Shaw, H., 2017. A Cryptographic System Based upon the Principles of Gene Expression. Cryptography, 1(3), p.21. |
1/22/2018 |
Trisha Chong |
Ramamurthi, K.S. and Losick, R., 2009. Negative membrane curvature as a cue for subcellular localization of a bacterial protein. Proceedings of the National Academy of Sciences, 106(32), pp.13541-13545. |
1/22/2018 |
Harmony Folse |
Coux, R.X., Teixeira, F.K. and Lehmann, R., 2018. L (3) mbt and the LINT complex safeguard cellular identity in the Drosophila ovary. Development, 145(7), p.dev160721. |
1/8/2018 |
Olivia de Goede |
Wang, P., Xu, J., Wang, Y. and Cao, X., 2017. An interferon-independent lncRNA promotes viral replication by modulating cellular metabolism. Science, 358(6366), pp.1051-1055. |
1/8/2018 |
Ellen Bouchard |
Allen, G.E., 1978. Thomas Hunt Morgan: the man and his science. |
12/11/2017 |
Stephanie Nevins |
Wang, X., Kellner, A.W., Jiang, S., Cheng, X., Wang, Q., Ma, Y., Paidoula, Y., Rodrigues, T., Chen, H., Sayão, J.M. and Li, N., 2017. Egg accumulation with 3D embryos provides insight into the life history of a pterosaur. Science, 358(6367), pp.1197-1201. |
12/11/2017 |
Nasa Sinnott-Armstrong |
Kumasaka, N., Knights, A. and Gaffney, D., 2017. High resolution genetic mapping of causal regulatory interactions in the human genome. BioRxiv, p.227389. |
12/4/2017 |
Alex Sockell |
Prüfer, K., de Filippo, C., Grote, S., Mafessoni, F., Korlević, P., Hajdinjak, M., Vernot, B., Skov, L., Hsieh, P., Peyrégne, S. and Reher, D., 2017. A high-coverage Neandertal genome from Vindija Cave in Croatia. Science, 358(6363), pp.655-658. |
12/4/2017 |
Ben Ober-Reynolds |
Gospocic, J., Shields, E.J., Glastad, K.M., Lin, Y., Penick, C.A., Yan, H., Mikheyev, A.S., Linksvayer, T.A., Garcia, B.A., Berger, S.L. and Liebig, J., 2017. The neuropeptide corazonin controls social behavior and caste identity in ants. Cell, 170(4), pp.748-759. |
11/27/2017 |
Alex Colville |
Rivera, N., Boada, A., Bielsa, M.I., Fernández-Figueras, M.T., Carcereny, E., Moran, M.T. and Ferrándiz, C., 2017. Hair repigmentation during immunotherapy treatment with an anti–programmed cell death 1 and anti–programmed cell death ligand 1 agent for lung cancer. JAMA dermatology, 153(11), pp.1162-1165. |
11/27/2017 |
Josh Tycko |
Schumacher, A.J., Mohni, K.N., Kan, Y., Hendrickson, E.A., Stark, J.M. and Weller, S.K., 2012. The HSV-1 exonuclease, UL12, stimulates recombination by a single strand annealing mechanism. PLoS pathogens, 8(8), p.e1002862. |
11/13/2017 |
Rachel Grant |
Brennan, P.L., Gereg, I., Goodman, M., Feng, D. and Prum, R.O., 2017. Evidence of phenotypic plasticity of penis morphology and delayed reproductive maturation in response to male competition in waterfowl. The Auk: Ornithological Advances, 134(4), pp.882-893. |
11/13/2017 |
Kelsey Roberts |
Wojcinski, A., Lawton, A.K., Bayin, N.S., Lao, Z., Stephen, D.N. and Joyner, A.L., 2017. Cerebellar granule cell replenishment postinjury by adaptive reprogramming of Nestin+ progenitors. Nature neuroscience, 20(10), p.1361. |
11/6/2017 |
Heidi Chen |
Will, A.J., Cova, G., Osterwalder, M., Chan, W.L., Wittler, L., Brieske, N., Heinrich, V., de Villartay, J.P., Vingron, M., Klopocki, E. and Visel, A., 2017. Composition and dosage of a multipartite enhancer cluster control developmental expression of Ihh (Indian hedgehog). Nature genetics, 49(10), p.1539. |
11/6/2017 |
Kristen Wells |
Seberg, H.E., Van Otterloo, E., Loftus, S.K., Liu, H., Bonde, G., Sompallae, R., Gildea, D.E., Santana, J.F., Manak, J.R., Pavan, W.J. and Williams, T., 2017. TFAP2 paralogs regulate melanocyte differentiation in parallel with MITF. PLoS genetics, 13(3), p.e1006636. |
10/30/2017 |
Tyler Shimko |
Yona, A.H., Alm, E.J. and Gore, J., 2018. Random sequences rapidly evolve into de novo promoters. Nature communications, 9(1), p.1530. |
10/30/2017 |
Roy Ang |
Enge, M., Arda, H.E., Mignardi, M., Beausang, J., Bottino, R., Kim, S.K. and Quake, S.R., 2017. Single-cell analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns. Cell, 171(2), pp.321-330. |
10/23/2017 |
Cameron Prybol |
Paten, B., Novak, A.M., Eizenga, J.M. and Garrison, E., 2017. Genome graphs and the evolution of genome inference. Genome research, 27(5), pp.665-676. |
10/23/2017 |
Dave Gennert |
Lippert, C., Sabatini, R., Maher, M.C., Kang, E.Y., Lee, S., Arikan, O., Harley, A., Bernal, A., Garst, P., Lavrenko, V. and Yocum, K., 2017. Identification of individuals by trait prediction using whole-genome sequencing data. Proceedings of the National Academy of Sciences, 114(38), pp.10166-10171. and Erlich E., 2017. Major flaws in “Identification of individuals by trait prediction using whole-genome sequencing data.” bioRxiv, p. 185330. |
10/16/2017 |
Nikki Teran |
Patel, A., Malinovska, L., Saha, S., Wang, J., Alberti, S., Krishnan, Y. and Hyman, A.A., 2017. ATP as a biological hydrotrope. Science, 356(6339), pp.753-756. |
10/16/2017 |
Albert Hinman |
Beach, R.R., Ricci-Tam, C., Brennan, C.M., Moomau, C.A., Hsu, P.H., Hua, B., Silberman, R.E., Springer, M. and Amon, A., 2017. Aneuploidy causes non-genetic individuality. Cell, 169(2), pp.229-242. |
10/9/2017 |
Nathan Abell |
Lello, L., Avery, S.G., Tellier, L., Vazquez, A.I., de los Campos, G. and Hsu, S.D., 2018. Accurate genomic prediction of human height. Genetics, 210(2), pp.477-497. |
10/9/2017 |
Theo Susanto |
Abudayyeh, O.O., Gootenberg, J.S., Essletzbichler, P., Han, S., Joung, J., Belanto, J.J., Verdine, V., Cox, D.B., Kellner, M.J., Regev, A. and Lander, E.S., 2017. RNA targeting with CRISPR–Cas13. Nature, 550(7675), p.280. |
10/2/2017 |
Robert Coukos |
Ben-David, E., Burga, A. and Kruglyak, L., 2017. A maternal-effect selfish genetic element in Caenorhabditis elegans. Science, 356(6342), pp.1051-1055. |
10/2/2017 |
David Yao |
Ma, H., Tu, L.C., Naseri, A., Chung, Y.C., Grunwald, D., Zhang, S. and Pederson, T., 2017. CRISPR-Based DNA Imaging in Living Cells Reveals Cell Cycle-Dependent Chromosome Dynamics. bioRxiv, p.195966. |